Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2 212 8e-50 seq4 102 1e-16 seq390 87.8 2e-12 seq73 87.8 2e-12 >seq2 Length=17630497 Score = 212 bits (234), Expect = 8e-50 Identities = 724/1108 (65%), Gaps = 33/1108 (3%) Strand=Plus/Plus Query 111993 GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTG 112052 ||| || |||| | || | ||||| |||||| ||| | | || ||||| ||| || Sbjct 6621623 GGAGCTTTCGCCATGTACTTGGAGCCCTGGCACTTTGATGTGTTTGACTTCCTGGAGCTG 6621682 Query 112053 CGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATT 112112 ||| ||| | |||||| | || | | || ||||||| ||| || ||||| Sbjct 6621683 AAGAAAAACACAGGAAAGGAGGAGCAGAGGGCCAGAGACCTCTTCTACGCCCTGTGGATC 6621742 Query 112113 CCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC 112172 || || || ||||||||||| || ||| | | | |||||||| | |||||| || Sbjct 6621743 CCCGACCTGTTCATGAAGAGGGTGGAGACCAACGAGGACTGGTCTCTGATGTGTCCAAAC 6621802 Query 112173 -AAGGCACCCGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGT 112230 || || ||||| || ||| ||| | ||| |||||||| || |||||||| | Sbjct 6621803 GAATGC-CCCGGGCTGGACGAGTGCTG-GGGGGAGGAGTTCGAGAAGCTCTACACCTCAT 6621860 Query 112231 ACGAGGAAGAAAGTCGGGCGACTGCG-ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATT 112289 | ||| ||||| | |||| || ||| |||| ||| | | ||| | || || Sbjct 6621861 ATGAGAAAGAAGGCCGGGTGA-AGCGTGTGGTGAAGGCTCAGCAGCTTTGGCACGCCATC 6621919 Query 112290 CTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAA 112349 | |||| || || || ||||| || ||||| ||||| ||||||||| |||| ||| Sbjct 6621920 ATTGAGTCCCAGACGGAAACTGGCACGCCATACATGCTCTACAAAGACTCCTGCAACAGG 6621979 Query 112350 AAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTG 112409 ||||| || || |||| |||| |||||||| |||||| || ||||||||| | Sbjct 6621980 AAGAGCAACCATCAGAACCTGGGCACCATCAAGAGCAGCAACCTGTGCACAGAAATCATT 6622039 Query 112410 GAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAG 112469 || | || | || ||| || || ||||| || || |||||||| ||| || | Sbjct 6622040 GAGTACACCAGCGGTGACGAGGTCGCCGTCTGTAATCTGGCCTCAATCGCACTCAACATG 6622099 Query 112470 TATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAA---A 112526 ||||| |||||| ||| ||||| | | ||||||| | || || || | Sbjct 6622100 TATGTCACCCCAGAG---CGGACTTTTGACTTTAAAAAACTAGCTTATGTGACCAAAGTA 6622156 Query 112527 ACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACT 112583 | |||| ||||| | |||| | || |||| || || ||||| || |||| Sbjct 6622157 ATTGTC---AAAAATTTGAACAAGATCATAGATATTAACTTCTACCCAGTGCCTGAG--- 6622210 Query 112584 GCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGAT 112643 || || || || | | | ||||| ||||| || |||||||||||||| | || || Sbjct 6622211 GCAGAGAAGTCCAACAAGCGTCACCGGCCAATAGGAATCGGTGTCCAAGGTTTGGCAGAC 6622270 Query 112644 GTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGT 112703 ||||| || || |||||||| || | || ||| || | || | Sbjct 6622271 ACCTTCATCCTCATGCGTCACGCATTCGAAAGCCCTGAGGCGCAGCTGCTGAACATTCAA 6622330 Query 112704 ATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGAT 112763 || |||||||| || || | ||||| || |||| || | ||| |||| | | Sbjct 6622331 ATCTTTGAGACCATCTACTATGCCGCCCTGGAGGGCAGCTGCGAGCTGGCCGCCGAGCTC 6622390 Query 112764 GGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA-CAAGGG-GTGCTTCAATTTGATA 112821 || || || || || | || || |||| | ||| |||||| | || || | || | Sbjct 6622391 GGCCCCTACGAGACATACGAAGG--CTCCCCCGTCAGCAAGGGCATCCTCCAGTACGACA 6622448 Query 112822 TGTGG--GAAGGTG-AGACCAAGCTTCACTACGACTGGGACGCT-CTCAAGGAACGCATC 112877 ||||| |||| | |||||||| | |||| ||| ||| ||||||||| ||| Sbjct 6622449 TGTGGGAGAAGACGCCCACCAAGCT---GTGGGACT-GGAAGCTGCTCAAGGAAAAGATC 6622504 Query 112878 AAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCA 112937 || | || | | |||||||| || |||| || ||||| || ||||||||||| Sbjct 6622505 GCCAAGCACGGGGTGAGGAACAGTCTGCTGCTGGCCCCGATGCCCACCGCCTCCACCGCC 6622564 Query 112938 CAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGA 112997 || ||| |||| || || || | | ||||| ||||||| | |||||||| | || Sbjct 6622565 CAGATCCTGGGCAACAACGAGTCCATTGAAGCCTACACCAGCAACATCTACACCCGCAGG 6622624 Query 112998 ACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATT 113057 |||| | |||||||| ||| || || ||||| | | ||||| | |||| Sbjct 6622625 GTCCTCTCCGGAGAGTTCCAGATAGTGAATCCCCATCTGCTCAAAGACCTGACGGAGAGA 6622684 Query 113058 GGTCTCTGGTCCAAGGATATGAAGGATC 113085 || || ||| | | ||||||||| ||| Sbjct 6622685 GGGCTGTGGAACGAAGATATGAAGAATC 6622712 >seq4 Length=14220794 Score = 102 bits (112), Expect = 1e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 102177 GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC 102236 || ||||||||| | ||||| || || ||||| |||||||||||||| |||||| Sbjct 7897679 GCGGAGCGACTCGTGGCATTCGCAGCGGTGGAGGGCATCTTCTTCTCTGGCTCCTTCGCT 7897620 Query 102237 GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTT 102296 | || |||||||||||||| || || || ||||| ||||| || |||||||||||| Sbjct 7897619 TCCATCTATTGGCTCAAGAAACGGGGACTGATGCCCGGTCTTACCTACTCCAACGAGCTG 7897560 Query 102297 ATCTCTCGTGACGAGG 102312 ||| | ||||||| Sbjct 7897559 ATCAGCAGGGACGAGG 7897544 >seq390 Length=2268 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263 || ||||| ||||||||||||||||||||| || || | ||||| |||||| |||| Sbjct 1936 GTGGAGGGAATCTTCTTCTCTGGTTCCTTCGCTGCCATCTTCTGGCTGAAGAAGAGAGGC 1995 Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 102299 || ||||| || || ||||||||||||||| ||| Sbjct 1996 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATC 2031 >seq73 Length=1910340 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263 || ||||| ||||||||||||||||||||| || || | ||||| |||||| |||| Sbjct 1745358 GTGGAGGGAATCTTCTTCTCTGGTTCCTTCGCTGCCATCTTCTGGCTGAAGAAGAGAGGC 1745299 Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 102299 || ||||| || || ||||||||||||||| ||| Sbjct 1745298 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATC 1745263 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263 || ||||| ||||||||||||||||||||| || || | ||||| |||||| |||| Sbjct 1749250 GTGGAGGGAATCTTCTTCTCTGGTTCCTTCGCTGCCATCTTCTGGCTGAAGAAGAGAGGC 1749191 Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 102299 || ||||| || || ||||||||||||||| ||| Sbjct 1749190 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATC 1749155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620699320477440