Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2 228 1e-54 seq18 82.4 9e-11 >seq2 Length=17630497 Score = 228 bits (252), Expect = 1e-54 Identities = 672/1016 (66%), Gaps = 35/1016 (3%) Strand=Plus/Minus Query 105837 GATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGT 105896 ||| ||||||||| | | ||| || || ||| | | || || |||| ||||| | Sbjct 6622712 GATTCTTCATATCTTCGTTCCACAGCCCTCTCTCCGTCAGGTCTTTGAGCAGATGGGGAT 6622653 Query 105897 TGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTT 105956 | || ||| |||||||| | |||| || | |||||||| | ||||||| || Sbjct 6622652 TCACTATCTGGAACTCTCCGGAGAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTT 6622593 Query 105957 CAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCA 106016 ||| | | || || || |||| ||| || ||||||||||| || ||||| || |||| || Sbjct 6622592 CAATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCGGTGGGCATCGGGGCCAGCA 6622533 Query 106017 AAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGT 106076 |||||||| | | || | | ||| ||||||||| | | |||||| | Sbjct 6622532 GCAGACTGTTCCTCACCCCGTGCTTGGCGATCTTTTCCTTGAGCAGCTTCCAGTCCCAC- 6622474 Query 106077 TGAGCTTGGTTT-CACCTTC--CCACATATCAAATTGAAGCAC-CCCTTGG-GACGTGGG 106131 |||||||| | |||| |||||| || | || || | |||||| |||| ||| Sbjct 6622473 --AGCTTGGTGGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTGCTGACGGGGG 6622416 Query 106132 AGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAG 106191 || || || ||||||| |||| || | | | |||| || ||||| ||||||| Sbjct 6622415 AG--CCTTCGTATGTCTCGTAGGGGCCGAGCTCGGCGGCCAGCTCGCAGCTGCCCTCCAG 6622358 Query 106192 GGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATC 106251 || || | || ||||| |||||||| || |||| | || || ||| || Sbjct 6622357 GGCGGCATAGTAGATGGTCTCAAAGATTTGAATGTTCAGCAGCTGCGCCTCAGGGCTTTC 6622298 Query 106252 AAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGG 106311 ||||||| || | || || || || | |||||| ||||| | || || || Sbjct 6622297 GAATGCGTGACGCATGAGGATGAAGGTGTCTGCCAAACCTTGGACACCGATTCCTATTGG 6622238 Query 106312 TCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAAT 106368 | ||| ||| | || ||||| | | | |||| || || || || || | || || Sbjct 6622237 CCGGTGACGCTTGTTGGACTT---CTCTGCCTCAGGCACTGGGTAGAAGTTAATATCTAT 6622181 Query 106369 GACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGA---AGTTTTTCATAATC 106425 || ||| | ||||||| ||||| | || | ||| | ||||||| | | || Sbjct 6622180 GATCTTGTTCAAATTTTTG---ACAATTACTTTGGTCACATAAGCTAGTTTTTTAAAGTC 6622124 Query 106426 AAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAAC 106485 |||||| || |||| |||||||| | || |||||||| |||| ||| || || Sbjct 6622123 AAAAGTCCG---CTCTGGGGTGACATACATGTTGAGTGCGATTGAGGCCAGATTACAGAC 6622067 Query 106486 AGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAAT 106545 || ||| || |||||||| | |||||||| |||| |||| ||||| || Sbjct 6622066 GGCGACCTCGTCACCGCTGGTGTACTCAATGATTTCTGTGCACAGGTTGCTGCTCTTGAT 6622007 Query 106546 CGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGG 106605 || |||| |||| ||||| ||||| ||||||| | || |||||||||||||| || Sbjct 6622006 GGTGCCCAGGTTCTGATGGTTGCTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTATGG 6621947 Query 106606 CGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAA 106664 ||| || || |||||||| |||| | || || | ||| | | | | | || || Sbjct 6621946 CGTGCCAGTTTCCGTCTGGGACTCAATGATGGCGTGCCAAAGCTGCTGAGCCTTCACCAC 6621887 Query 106665 TGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCA 106724 || || |||| || || ||| || |||||||| || |||||||| ||| Sbjct 6621886 ACGC-TTCACCCGGCCTTCTTTCTCATATGAGGTGTAGAGCTTCTCGAACTCCTC-CCCC 6621829 Query 106725 CCGC-GTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCACCCT- 106781 | || ||| || || || || || || |||||| | |||||||| | || | | Sbjct 6621828 CAGCACTCGTCCAG-CCCGGGGCATTCGTTTGGACACATCAGAGACCA--GTCCTCGTTG 6621772 Query 106782 -CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCT 106836 ||| |||| ||||||||| ||||| || |||||||||| | ||||| ||||| Sbjct 6621771 GTCTCCACCCTCTTCATGAACAGGTCGGGGATCCACAGGGCGTAGAAGAGGTCTCT 6621716 >seq18 Length=14161719 Score = 82.4 bits (90), Expect = 9e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551 |||||| || ||||||||||| || || || |||| ||| || || || || Sbjct 3645533 CTCATCTTTGCTTGTGTACTCTACTATCTCCGTGCACAGATTGCTGGATTTGATGGTGCC 3645592 Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611 || |||| ||||||||||| ||||||| || ||||||||||| ||||| || || || Sbjct 3645593 CAGGTTCTGCTGGTTACTCTTCCTGTTGCAGGCGTCCTTGTAGAGTATGTACGGTGTGCC 3645652 Query 106612 CGTCTCCGTCTGTGA 106626 ||| || || || || Sbjct 3645653 CGTTTCTGTTTGAGA 3645667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589939855332480