Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq50 161 8e-34 seq49 140 3e-27 seq2 118 9e-21 seq3 113 4e-19 seq33 104 2e-16 seq41 91.5 1e-12 >seq50 Length=5617500 Score = 161 bits (178), Expect = 8e-34 Identities = 518/797 (65%), Gaps = 10/797 (1%) Strand=Plus/Plus Query 551799 CATCTTGGTGGCGAAGATTTTGATAATAGACTGGTAT--CATGGTGTGTTGAAGATTTTA 551856 |||||||| || || || ||||| || || ||||| ||| | |||||| || |||| Sbjct 140835 CATCTTGGCGGGGAGGACTTTGACAACAGGATGGTAAACCAT--TTTGTTGAGGAATTTA 140892 Query 551857 AACGAAAAAACAA--AGTTGATCTATCTACATCTGCCAAAGCTCTTCGTCGTCTAAGAAC 551914 | ||||| |||| || ||| | | || | | |||| | | | || | || Sbjct 140893 AGAGAAAACACAAGAAGGACATCAGCCAAAATAAG--AGAGCTGTGAGGAGGCTGCGCAC 140950 Query 551915 TGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGA 551974 |||||||| |||||||| | | || || || | || || | | |||||| | || Sbjct 140951 AGCTTGCGAGAGAGCCAAGAGGACCCTGTCCTCCAGCACCCAGGCTAGTATTGAGATCGA 141010 Query 551975 TTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATAT 552034 ||| | |||||||| ||||| | | || | ||| ||||||| |||||||| | Sbjct 141011 TTCTCTGTTTGAGGGCATTGACTTCTACACCTCCATTACGAGGGCACGGTTTGAAGAACT 141070 Query 552035 TTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAA 552094 || || || || || ||| | || ||||| || | | | |||| | || Sbjct 141071 CAACTCGGAGCTTTTCAGGGGAACGCTGGAGCCAGTTGAGAAGGCCCTGCAAGATGCCAA 141130 Query 552095 GATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAA 552154 | | ||||| ||||| | ||||||||||| || |||||||| ||||| |||||||| || Sbjct 141131 GCTGGATAAGTCCAAGATTCATGAAATTGTTCTGGTTGGTGGCTCTACGAGAATTCCCAA 141190 Query 552155 AATTCGCGAAATGTT-AAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATC 552213 ||| | | | || || ||| ||| ||||| | | || | || | || | |||| Sbjct 141191 AATCCAGAAGCTTTTGCAGGACTT-TTTTAATGGCAGAGAACTGAACAAGAGCATCAATC 141249 Query 552214 CAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTG 552273 ||||||| ||||| |||| |||||| | | || || ||||| || || | ||| Sbjct 141250 CAGATGAAGCTGTAGCCTGTGGTGCATCGGTCCAGGCTGCTATCCTCATGGGTGATACTT 141309 Query 552274 ATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAA 552333 || || | ||| || | | ||| | || || ||||||| ||||| ||| | || | Sbjct 141310 CAGAGAATGTCCAAGATCTGCTGCTTCTGGACGTGGCTCCTCTGTCTCTGGGTATTGAGA 141369 Query 552334 CAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAAT 552393 | | || || | ||||| ||| ||| | |||| || || || || || | Sbjct 141370 CTGCAGGTGGAGTCATGACGCCTCTAATCAAACGAAACACAACCATCCCCACCAAGCAGA 141429 Query 552394 CTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAG 552453 | | | || || || || || || || || | | ||| ||||| | | ||| | Sbjct 141430 CCCAGATCTTCTCCACATACTCTGACAACCAGCCAGGTGTGCTGATTCAGGTATATGAGG 141489 Query 552454 GAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTC 552513 | || ||| | || || ||||| || | || || | ||| | | ||||| | Sbjct 141490 GTGAGAGAGCCATGACCAAGGATAACAACCTTCTGGGCAAGTTTGAGCTCACGGGTATCC 141549 Query 552514 CTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAA 552573 | |||||||| || || ||||| || | || || || || || |||||||| || || | Sbjct 141550 CCCCTGCTCCCCGAGGTGTACCACAGGTAGAGGTAACGTTTGACATCGATGCTAACGGCA 141609 Query 552574 TTTTGAATGTGACTGCT 552590 || |||| ||| ||||| Sbjct 141610 TTCTGAACGTGTCTGCT 141626 Score = 113 bits (124), Expect = 4e-19 Identities = 389/599 (65%), Gaps = 21/599 (4%) Strand=Plus/Plus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || || || ||||| || ||||| || ||||| || |||| || | || |||||| Sbjct 140175 ATCGGCATTGATTTGGGTACCACCTACTCATGTGTAGGGGTTTTCCAGCACGGCAAAGTT 140234 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 || || ||||| || ||||| || ||||| || ||||| ||||| | || || || Sbjct 140235 GAGATCATTGCTAACGATCAGGGCAACAGGACCACTCCCAGCTATGTGGCCTTTACTGAC 140294 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAG---CCACTGGTAATCCTACCAAT 550171 ||||| | |||| ||||| || || | || | ||| || || || ||||| Sbjct 140295 ACTGAGAGGCTCATTGGAGATGCTGCCAAGAACCAGGTTGCCA-TG--AACCCCACCAAC 140351 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || || ||||| || ||||| | || || |||| ||||| || || ||| | Sbjct 140352 ACAATCTTTGACGCCAAACGGCTCATCGGTAGAAAGTTTAACGACAAAGTAGTCCAGTCC 140411 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 || ||||| | |||||||| | | | |||| | ||||| || | | | || | Sbjct 140412 GACATGAAACTATGGCCTTTTAAGGTGATCAATGATAATGGAAGGCCCAA-AGTACAGGT 140470 Query 550292 --ACTCATGAAGGATCTGTTAAACAA----TTTTCACCAGAACAAATTTCATCTATGGTT 550345 | | || |||| | | ||| || | ||||| | || || || ||||| Sbjct 140471 GGAGT-ATAAAGG----GGAGACCAAGGCCTTCTACCCAGAGGAGATCTCCTCCATGGTC 140525 Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTA 550405 | | ||||||||| | | || || || | || || ||| | ||||||| Sbjct 140526 CTGGTAAAAATGAAAGAGATTGCTGAGGCCTTCCTGGGGCAGAGAGTGTCAAATGCAGTC 140585 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465 || || || ||||| ||||| |||||||| || | ||||| || || || || || Sbjct 140586 ATCACAGTTCCAGCTTATTTCAATGACTCCCAGAGACAAGCCACCAAGGACGCCGGGGTG 140645 Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 || ||||||| |||||||| | || ||||| || || || || || || |||| ||| Sbjct 140646 ATCTCTGGACTGAATGTTCTGAGGATCATCAACGAGCCCACAGCAGCAGCCATTGCTTAT 140705 Query 550526 GGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGA---TTGTGGAGG 550581 || | |||||| || | ||| | || || ||||||||||| | ||||||| Sbjct 140706 GGTTTGGATAAAGGAAAAAAGGGAGAGCGCAACGTGCTCATCTTTGACCTTGGTGGAGG 140764 >seq49 Length=3270273 Score = 140 bits (154), Expect = 3e-27 Identities = 437/677 (65%), Gaps = 0/677 (0%) Strand=Plus/Minus Query 551913 ACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTA 551972 || ||||| || || ||||| || | || || || | | || ||| || || | Sbjct 1602756 ACGGCTTGTGAGAGGGCCAAGAGAACCCTGTCGTCCAGCTCCCAGGCCAGCATCGAGATT 1602697 Query 551973 GATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGAT 552032 ||||| | |||||||| || || | | || | || | ||||| ||||| || Sbjct 1602696 GATTCTCTGTTTGAGGGCATCGACTTCTACACCTCCATCACCAGGGCTCGCTTTGAGGAG 1602637 Query 552033 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCA 552092 | || || || || || || |||||| | |||||||| ||||| | | || ||| || Sbjct 1602636 CTGTGCTCCGACCTTTTCAGGAAAACATTGGAACCAGTGGAACATGCCCTGAGGGATGCA 1602577 Query 552093 AAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCT 552152 || || || || | ||| | |||| |||| || ||||| || || || |||| || Sbjct 1602576 AAAATGGACAAGGCAAAAATTGATGATGTTGTCCTGGTTGGAGGTTCCACCCGAATCCCC 1602517 Query 552153 AAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAAT 552212 | ||| | || | | || |||||||| ||| || | ||| | || | ||| Sbjct 1602516 AGAATCCAGAAACTCCTGCAGGATTTCTTCAATGGGAAAGAACTGAATAAGAGCATCAAT 1602457 Query 552213 CCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACT 552272 ||||||||||| || ||||||||||| || | |||| || ||||| | || | || Sbjct 1602456 CCAGATGAGGCGGTGGCCTATGGTGCTGCTGTCCAAGGTGCCATTCTGACAGGTGATACC 1602397 Query 552273 GATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAA 552332 | || | || | | | || | || || | ||||| ||||| || | || Sbjct 1602396 TCAGGTAATGTTCAGGACCTGCTGCTGCTGGACGTGGCACCTCTGTCTCTGGGCATTGAG 1602337 Query 552333 ACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAA 552392 |||| ||||| | ||||| || || || | |||| ||||| || |||||| Sbjct 1602336 ACAGCAGGAGGCGTCATGACAGCCCTGATAGAACGCAATAGCACTATCCCAACTAAAAAG 1602277 Query 552393 TCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAA 552452 | | || || | ||||| |||||||| || | | || || || | | ||| Sbjct 1602276 ACCCAGGTCTTCACCACGTACTCAGATAACCAGCCCGGGGTCCTCATCCAGGTCTACGAA 1602217 Query 552453 GGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATT 552512 || |||||| | || || || || || | || || | ||| | | ||| || Sbjct 1602216 GGTGAAAGAGCCATGACCAAGGACAACAACCTGCTGGGCAAGTTTGAGCTGACAGGAATC 1602157 Query 552513 CCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGA 552572 || ||||||||||| || || ||||| || || || || ||||| | || ||||| ||| Sbjct 1602156 CCACCTGCTCCTCGAGGGGTGCCGCAGATCGAGGTCACCTTCGACGTGGACGCCAACGGA 1602097 Query 552573 ATTTTGAATGTGACTGC 552589 ||| |||| ||| |||| Sbjct 1602096 ATTCTGAACGTGTCTGC 1602080 >seq2 Length=17630497 Score = 118 bits (130), Expect = 9e-21 Identities = 110/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| ||| | ||||| || || || |||||||||||||| || || || || ||||||| Sbjct 8353743 ATGCTGTAGTGACTGTGCCTGCCTACTTTAATGACTCACAGCGCCAGGCCACCAAAGATG 8353802 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 | || ||| |||| || ||||| |||||||| || |||||||| ||||||||||| Sbjct 8353803 CGGGGACCATTTCTGGCCTGAATGTCCTTCGTATCATTAATGAACCAACTGCTGCTGCTA 8353862 Query 550518 TTGCATATGGACTTGATAAA 550537 |||| ||||| || || ||| Sbjct 8353863 TTGCTTATGGCCTGGACAAA 8353882 >seq3 Length=24902066 Score = 113 bits (124), Expect = 4e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312 ||| ||||| | |||||||||||||| |||||| || |||||||||| || || Sbjct 14702556 CCTCAGACGCAAGACAAGATGAAGGGTGGATTCTTTTTGGATGTTGTAATCAGAGAGGGT 14702615 Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372 | ||||||||| || ||||||||||| || || || ||||| ||||||||||| || Sbjct 14702616 GCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCC 14702675 Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAG 563432 |||||| || || || || || || ||||| || ||| || | || || Sbjct 14702676 TTCTTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCACTGGCCTCAACCTCAAG 14702735 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||| ||||| || || || || || ||||| || ||||| Sbjct 14702736 GGTAATGGTTTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 14702777 Score = 102 bits (112), Expect = 7e-16 Identities = 158/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312 ||| ||||| | |||||||||||||| |||||| || |||||||||| || || Sbjct 14702328 CCTCAGACGCAAGACAAGATGAAGGGTGGATTCTTTTTGGATGTTGTAATCAGAGAGGGT 14702387 Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372 | ||||||||| || ||||||||||| || || || ||||| ||||| ||||| || Sbjct 14702388 GCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCC 14702447 Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTG-AGTACATTCGA 563431 ||| || || || || || || || ||| | || || || | ||| || | Sbjct 14702448 TTCCTTGTCCTGGATCTTGGTCTTCACGTTCTCCACAGTGTCGCTGGGCTCTAC-CTCAA 14702506 Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||| | || || || || || || || |||||||||||||| Sbjct 14702507 GAGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAAATTTGCAT 14702549 >seq33 Length=5647056 Score = 104 bits (114), Expect = 2e-16 Identities = 101/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || || || || ||||| || || |||||||| || || || || || ||||||| Sbjct 4627062 ATGCTGTTATTACGGTGCCAGCCTACTTCAATGACTCCCAGCGCCAGGCCACGAAAGATG 4627003 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 |||| || |||| || ||||||||||| || |||||||| || || |||||||| Sbjct 4627002 CTGGCACAATCTCTGGCCTCAATGTTCTTCGGATCATCAATGAGCCGACCGCTGCTGCTA 4626943 Query 550518 TTGCATATGG 550527 |||||||||| Sbjct 4626942 TTGCATATGG 4626933 >seq41 Length=3749131 Score = 91.5 bits (100), Expect = 1e-12 Identities = 102/135 (76%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 ||||||| || || || || || || || ||||| || || |||||||| || ||||||| Sbjct 202437 ATGCAGTTATTACAGTTCCTGCTTACTTCAATGATTCTCAGCGTCAAGCCACCAAAGATG 202496 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 ||||| ||||| || || ||||| || || || ||||| || || || ||||| || Sbjct 202497 CTGGAACCATTGCAGGGCTAAATGTGCTGCGAATCATCAACGAGCCCACGGCTGCAGCCA 202556 Query 550518 TTGCATATGGACTTG 550532 | || ||||| |||| Sbjct 202557 TCGCTTATGG-CTTG 202570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029002385200480