Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2 233 4e-56 seq390 111 3e-19 seq73 111 3e-19 seq4 100 5e-16 seq18 96.9 6e-15 >seq2 Length=17630497 Score = 233 bits (258), Expect = 4e-56 Identities = 350/491 (71%), Gaps = 7/491 (1%) Strand=Plus/Minus Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772 |||||| ||||| ||||| |||||||| | |||| |||| ||||| ||||| || || Sbjct 6622081 GGCCAGATTACAGACGGCGACCTCGTCACCGCTGGTGTACTCAATGATTTCTGTGCACAG 6622022 Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTT 221832 |||||||| ||||||||| ||||||| | || || ||| | ||| | ||| || Sbjct 6622021 GTTGCTGCTCTTGATGGTGCCCAGGTTCTGATGGTTGCTCTTCCTGTTGCAGGAGTCTTT 6621962 Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTC 221892 ||||||||| | || |||||| ||| ||| | | | | || || ||| || | Sbjct 6621961 GTAGAGCATGTATGGCGTGCCAGTTTCCGTCTGGGACTCAATGATGGCGTGCCAAAGCTG 6621902 Query 221893 TCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTT-TCATACCCGGTATAGAGC 221950 ||| || ||||| | ||| || | ||| ||||| ||||| ||| |||||| Sbjct 6621901 -CTGAGCCTTCACCACACGCTTCACC-CGGCCT---TCTTTCTCATATGAGGTGTAGAGC 6621847 Query 221951 ATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGA 222010 | || |||| || || | ||||||||| || || || | |||||||||||| Sbjct 6621846 TTCTCGAACTCCTCCCCCCAGCACTCGTCCAGCCCGGGGCATTCGTTTGGACACATCAGA 6621787 Query 222011 CTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGA 222070 ||||| || |||| | ||||||| |||||| ||||| ||||||||||| || | Sbjct 6621786 GACCAGTCCTCGTTGGTCTCCACCCTCTTCATGAACAGGTCGGGGATCCACAGGGCGTAG 6621727 Query 222071 AAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCA 222130 ||||| ||||||| || |||||||||| || |||||||| |||| |||| || ||| Sbjct 6621726 AAGAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTTTTCTTCAGCTCCAGGAAGTCA 6621667 Query 222131 AAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCA 222190 || | ||| |||||| ||||||| || | ||| | ||| ||||| | ||||||||| Sbjct 6621666 AACACATCAAAGTGCCAGGGCTCCAAGTACATGGCGAAAGCTCCGGGCCTCTTGTTGCCG 6621607 Query 222191 CCCTGATCCAC 222201 ||||| || || Sbjct 6621606 CCCTGGTCGAC 6621596 Score = 105 bits (116), Expect = 1e-17 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 221065 CATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCAC 221124 ||| || || |||| || || ||||| ||| | |||| || || ||||| | Sbjct 6622705 CATATCTTCGTTCCACAGCCCTCTCTCCGTCAGGTCTTTGAGCAGATGGGGATTCACTAT 6622646 Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184 ||||| ||||| ||||| ||||| | ||| | ||| ||| | | ||| ||| Sbjct 6622645 CTGGAACTCTCCGGAGAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCAATGGA 6622586 Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244 ||||||||||||||||||||| || ||| |||||||||||| || |||| ||||||||| Sbjct 6622585 CTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCGGTGGGCATCGGGGCCAGCAGCAGACT 6622526 Query 221245 GTT 221247 ||| Sbjct 6622525 GTT 6622523 >seq390 Length=2268 Score = 111 bits (122), Expect = 3e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| |||| || || || || |||||||| ||||| ||| ||||| || || Sbjct 1909 GGAGAGCGCGTGGTGGCGTTCGCCGCCGTGGAGGGAATCTTCTTCTCTGGTTCCTTCGCT 1968 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 |||||||||||||| ||| ||| || |||||||| ||| ||| |||||||||||| Sbjct 1969 GCCATCTTCTGGCTGAAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTC 2028 Query 25993 ATCAGCAGGGACGAGG 26008 |||||||| || |||| Sbjct 2029 ATCAGCAGAGATGAGG 2044 >seq73 Length=1910340 Score = 111 bits (122), Expect = 3e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| |||| || || || || |||||||| ||||| ||| ||||| || || Sbjct 1745385 GGAGAGCGCGTGGTGGCGTTCGCCGCCGTGGAGGGAATCTTCTTCTCTGGTTCCTTCGCT 1745326 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 |||||||||||||| ||| ||| || |||||||| ||| ||| |||||||||||| Sbjct 1745325 GCCATCTTCTGGCTGAAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTC 1745266 Query 25993 ATCAGCAGGGACGAGG 26008 |||||||| || |||| Sbjct 1745265 ATCAGCAGAGATGAGG 1745250 Score = 111 bits (122), Expect = 3e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| |||| || || || || |||||||| ||||| ||| ||||| || || Sbjct 1749277 GGAGAGCGCGTGGTGGCGTTCGCCGCCGTGGAGGGAATCTTCTTCTCTGGTTCCTTCGCT 1749218 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 |||||||||||||| ||| ||| || |||||||| ||| ||| |||||||||||| Sbjct 1749217 GCCATCTTCTGGCTGAAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTC 1749158 Query 25993 ATCAGCAGGGACGAGG 26008 |||||||| || |||| Sbjct 1749157 ATCAGCAGAGATGAGG 1749142 >seq4 Length=14220794 Score = 100 bits (110), Expect = 5e-16 Identities = 104/134 (78%), Gaps = 2/134 (1%) Strand=Plus/Minus Query 25876 GAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCC 25935 ||||| || || || || || || |||||||||||||| ||| || || || || || Sbjct 7897676 GAGCGACTCGTGGCATTCGCAGCGGTGGAGGGCATCTTCTTCTCTGGCTCCTTCGCTTCC 7897617 Query 25936 ATCTTCTGGCTCAAGCAGAAGGGGACC-ATGCCCGGGCTGTACTTTTCCAACGAGCTCAT 25994 |||| ||||||||| | | |||||| |||||||| || || ||||||||||| || Sbjct 7897616 ATCTATTGGCTCAAGAA-ACGGGGACTGATGCCCGGTCTTACCTACTCCAACGAGCTGAT 7897558 Query 25995 CAGCAGGGACGAGG 26008 |||||||||||||| Sbjct 7897557 CAGCAGGGACGAGG 7897544 >seq18 Length=14161719 Score = 96.9 bits (106), Expect = 6e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 222040 CATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCAC 222099 |||||||||||| ||||||||||| || || | ||||||| | ||||||||| Sbjct 3646052 CATGAAGAGGTCTGGGATCCACAGGGCAAAGAACAAGTCTCTGGCTCTCTGCTCCTCTTT 3646111 Query 222100 GCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATA 222159 ||| |||| ||| ||| ||||| || ||||| | ||||| |||||||||||||| || Sbjct 3646112 GCCTGTGTTCTTCTTCAACTCCAAGAATTCAAACACATCAGCATGCCACGGCTCCAGGTA 3646171 Query 222160 GACGGCCAGAGCGCCGGGTCGCT 222182 || || | || || |||| || Sbjct 3646172 CACAGCGAAGGCCCCCGGTCTCT 3646194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928780338170880