Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq31 201 1e-46 >seq31 Length=8019404 Score = 201 bits (222), Expect = 1e-46 Identities = 607/926 (66%), Gaps = 60/926 (6%) Strand=Plus/Minus Query 160062 TCCAGACATTGGACGGCGAACACGTCAACGTCTTCG--TCGAATTTATTTGCGAACAGAT 160119 ||||| ||| ||| ||| | | ||||| ||| | ||||| ||||| ||||| || | Sbjct 4772259 TCCAGGCATCGGATGGCCACATCATCAAC--CTTGGGATCGAACTTATTGGCGAAGAGGT 4772202 Query 160120 GGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGACGGAACGTA 160179 | | | | |||| ||| | | ||| || | ||| ||||||| || | | Sbjct 4772201 GTCGCTGATCC---AGGAGCCACCGGATGTCCCCCGTTCCGTACACGCACACCGCTCTCC 4772145 Query 160180 TGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTCGTAGTACT 160239 ||| | ||| |||| ||| |||| | || || ||| |||||| | | || Sbjct 4772144 TGTACGTCCCGGTGCACGGCTCGTACGGGGCCCCACGGATCACCTCACCTGCCAAATAGC 4772085 Query 160240 GCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTACATCAGGG 160299 |||||||||| || | | |||||||||||||| |||||||| || | || Sbjct 4772084 TCCACTTCACAGCCCGCACCACGGCCTGCATGTCGGACGTGTCGTACTTAATGTTGGTGG 4772025 Query 160300 GAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGC 160359 | | || ||||| ||| |||||| | ||| || || ||||||||||| || || |||| Sbjct 4772024 GCAGGGACCCGGGCACGGAGGGCATCCTCTGCAGAGTCGCCCACAGGTGCTCATCCGGGC 4771965 Query 160360 TGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG----TCCCGCAGAACG 160415 ||||||||||||| ||| |||| | || ||||| |||| ||| ||| || Sbjct 4771964 TGTACGTGTCCTTCTCCCACTCCAGAAGCT-TCCGA---ACCTCCGCATCCTTCAGCACA 4771909 Query 160416 TGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTATGGGT 160475 ||| || ||| || || || | || || || | || ||||| || || || | Sbjct 4771908 TGACCCACAAAGGCCCTCGTGACAGCGAAATAGGCATTTCCCGAGAACATGGGGGTGCTT 4771849 Query 160476 ATAGGCGGCGTGTCTTT----------GTCCTGAC--CGGTGTTAGACACCACTCCTTTC 160523 |||||||||| | ||| |||||||| ||||||| | || || Sbjct 4771848 ATAGGCGGCGGGCTTTTCCGCACGTTCGTCCTGACGACGGTGTTGGTGACG------TT- 4771796 Query 160524 ACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTG--CGGTGGCATGCGTTCCGTCT 160581 ||| | | || ||| | | |||| | || ||| || || |||| Sbjct 4771795 --------GTGATGATACTGCCAGCGCTGCTTCTTATAGTCGTTGG--TGATCTCGGTCT 4771746 Query 160582 CTAGACTGTT--GGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTT 160639 | | ||||| ||| || ||| | |||||| || ||| |||||| ||| ||||| Sbjct 4771745 CCATGCTGTTCTGGCCCCT--GAGGGCCTTCAGCGCCTGGACCATCTCTCTGTTGGTCTT 4771688 Query 160640 GAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTC----GCGCTCAGGT 160695 || || |||||||| ||||| ||||| || |||| |||| || ||| || | Sbjct 4771687 GATGGGGAAGTCGGTCCCGCAGGTGTTTAGCAAGTACCTCCACTTAATCTGCG---AGTT 4771631 Query 160696 CGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTA 160755 | |||| || |||| || || | |||||||||||| ||| ||| || |||||||| | Sbjct 4771630 CA-GCAGATCTTTCATACAGTTCAAATCTGCCTGCACCCGGGACCACGAGGCGTACACCA 4771572 Query 160756 CGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCG 160815 | | |||| | | |||| | || |||||| || || || ||||| || |||| | Sbjct 4771571 CACTTTCTAATCTGGTGGCTATGAACACGTTAGGAAAGCAGGAGACGATCGCCTCCACAG 4771512 Query 160816 CCAGAAAGAACATCTT-ATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGC 160874 || |||| |||| || | |||| |||| ||||||||| || | ||||| ||| Sbjct 4771511 CCGCCTTGAAC-TCTTCATTGGACTTTTTATCCAGGTGCACGCAGTAGATATTCTGGGGC 4771453 Query 160875 GCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAG 160934 ||||| |||| | || | | ||| |||||||| |||| | ||||||||| || ||| Sbjct 4771452 GCGTAAATGGAGCGCAGGAGTCGCTCAAACATCTCGATCTGCTCATGGATCACCATGGAG 4771393 Query 160935 TAGGCTATCGGAAACTCGGTCTCCTC 160960 || || || || || || ||||||| Sbjct 4771392 TAAGCGATGGGGAAGTCTCTCTCCTC 4771367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577179140987520