Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2 219 5e-52 seq18 95.1 1e-14 >seq2 Length=17630497 Score = 219 bits (242), Expect = 5e-52 Identities = 671/1016 (66%), Gaps = 35/1016 (3%) Strand=Plus/Plus Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG--AGG 75743 ||||| ||||| | |||||||||| || ||||| ||||||||| |||| ||| | Sbjct 6621716 AGAGACCTCTTCTACGCCCTGTGGATCCCCGACCTGTTCATGAAGAGGGTGGAGACCAAC 6621775 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGAC-GCGGTGGG 75801 | || | |||||||| | |||||| || || || || || || ||| || | ||| Sbjct 6621776 GAGGAC--TGGTCTCTGATGTGTCCAAACGAATGCCCCGGG-CTGGACGAGTGCTGGGGG 6621832 Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGT 75861 |||||||| || |||||||| ||||| | || || | | || ||| || Sbjct 6621833 -GAGGAGTTCGAGAAGCTCTACACCTCATATGAGAAAGAAGGCCGGGTGAA-GCGTGTGG 6621890 Query 75862 ACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920 || | | | | ||||| | || || | | || |||||||| ||||| || |||| Sbjct 6621891 TGAAGGCTCAGCAGCTTTGGCACGCCATCATTGAGTCCCAGACGGAAACTGGCACGCCAT 6621950 Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980 | ||||| ||||| || | || |||| |||||| ||||| |||| |||| || |||| Sbjct 6621951 ACATGCTCTACAAAGACTCCTGCAACAGGAAGAGCAACCATCAGAACCTGGGCACCATCA 6622010 Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040 ||||| || || ||||| ||||| | |||||||| || ||| || || | Sbjct 6622011 AGAGCAGCAACCTGTGCACAGAAATCATTGAGTACACCAGCGGTGACGAGGTCGCCGTCT 6622070 Query 76041 GCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATT 76100 | ||| |||| |||||||| || | |||||||| |||| || |||||||| | Sbjct 6622071 GTAATCTGGCCTCAATCGCACTCAACATGTATGTCACCCCAGAG---CGGACTTTTGACT 6622127 Query 76101 ATGAAAAACTTCATGAAATCAC-AAAG--ATTGTTACCAAAAATCTAAACCGAGTCATTG 76157 | ||||||| | | | || |||| ||||| ||||||| | ||| |||| | Sbjct 6622128 TTAAAAAACTAGCTTATGTGACCAAAGTAATTGT---CAAAAATTTGAACAAGATCATAG 6622184 Query 76158 ACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTA 76214 | | || || || || || |||| | | | ||||| || | ||| ||| | || | Sbjct 6622185 ATATTAACTTCTACCCAGTGCCTGAGGCAGAG---AAGTCCAACAAGCGTCACCGGCCAA 6622241 Query 76215 TTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATT 76274 | || | ||||| |||||| | || || || || | || ||||||| || Sbjct 6622242 TAGGAATCGGTGTCCAAGGTTTGGCAGACACCTTCATCCTCATGCGTCACGCATTCGAAA 6622301 Query 76275 CAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGG 76334 ||| || || | |||| || |||||||| ||||| || | || |||||| Sbjct 6622302 GCCCTGAGGCGCAGCTGCTGAACATTCAAATCTTTGAGACCATCTACTATGCCGCCCTGG 6622361 Query 76335 AGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCG 76394 ||| || || || |||| | | | || |||| ||||||| || || ||||| Sbjct 6622362 AGGGCAGCTGCGAGCTGGCCGCCGAGCTCGGCCCCTACGAGACATACGAAGG--CTCCCC 6622419 Query 76395 CGTCC-CAAGGGG-TGCTTCAGTTTGATATGTGGGA--AGGTGAA-ACCAAGCTCAACTA 76449 |||| |||||| | || |||| || |||||||| || | |||||||| | Sbjct 6622420 CGTCAGCAAGGGCATCCTCCAGTACGACATGTGGGAGAAGACGCCCACCAAGCTG---TG 6622476 Query 76450 CGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGAT 76509 |||||| | | ||||||||| ||| || | || | | |||||||| || | Sbjct 6622477 GGACTGGAAGCTGCTCAAGGAAAAGATCGCCAAGCACGGGGTGAGGAACAGTCTGCTGCT 6622536 Query 76510 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 76569 ||| || ||||| || ||||||||||| || ||| |||| || || || | | ||||| | Sbjct 6622537 GGCCCCGATGCCCACCGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATTGAAGC 6622596 Query 76570 ATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAA 76629 ||||| | ||||||||| | || |||| | || ||||| || || || Sbjct 6622597 CTACACCAGCAACATCTACACCCGCAGGGTCCTCTCCGGAGAGTTCCAGATAGTGAATCC 6622656 Query 76630 GCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATC 76685 || || |||| ||||| | | ||| || || ||| | | ||||||||| ||| Sbjct 6622657 CCATCTGCTCAAAGACCTGACGGAGAGAGGGCTGTGGAACGAAGATATGAAGAATC 6622712 >seq18 Length=14161719 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 75891 TCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGA 75950 || |||| || || || || || ||||| || || || |||||||| || || |||| || Sbjct 3645672 TCGAATCTCAAACAGAAACGGGCACACCGTACATACTCTACAAGGACGCCTGCAACAGGA 3645613 Query 75951 AGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAG 76010 |||||||||| |||| |||| || ||||| | ||||| |||||||| || ||| Sbjct 3645612 AGAGTAACCAGCAGAACCTGGGCACCATCAAATCCAGCAATCTGTGCACGGAGATAGTAG 3645553 Query 76011 AGTACACAGATAAGGATGAG 76030 |||||||| || |||||| Sbjct 3645552 AGTACACAAGCAAAGATGAG 3645533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596528198069760