Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq3 113 8e-20 >seq3 Length=24902066 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || || |||| || || |||||||| | || | ||||| || ||||||||| Sbjct 14701520 ATGCCGCCCCTCAGACGCAGGACCAGATGGAGGGTGGATTCTTTCTGGATGTTATAGTCG 14701579 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | |||| ||| |||| ||||| || ||||| || | ||||| ||||||||| Sbjct 14701580 GAGAGGGTTCGGCCATCCTCTAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGA 14701639 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || || || || |||||||| | ||| || ||| || | |||| Sbjct 14701640 GGGATGCCTTCCTTGTCCTGGATCTTGGTTTTCACATTCTCAACAGTGTCACTGGCCTCA 14701699 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||| || || || || || || || || || ||||| || ||||| Sbjct 14701700 ACCTCTAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 14701749 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || || |||| || || |||||||| | || | ||||| || ||||||||| Sbjct 14701748 ATGCCGCCCCTCAGACGCAGGACCAGATGGAGGGTGGATTCTTTCTGGATGTTATAGTCG 14701807 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | |||| ||| |||| ||||| || ||||| || | ||||| ||||||||| Sbjct 14701808 GAGAGGGTTCGGCCATCCTCTAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGA 14701867 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || || || || |||||||| | ||| || ||| || | |||| Sbjct 14701868 GGGATGCCTTCCTTGTCCTGGATCTTGGTTTTCACATTCTCAACAGTGTCACTGGCCTCA 14701927 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||| || || || || || || || || || ||||| || ||||| Sbjct 14701928 ACCTCTAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 14701977 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || || |||| || || |||||||| | || | ||||| || ||||||||| Sbjct 14701976 ATGCCGCCCCTCAGACGCAGGACCAGATGGAGGGTGGATTCTTTCTGGATGTTATAGTCG 14702035 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | |||| ||| |||| ||||| || ||||| || | ||||| ||||||||| Sbjct 14702036 GAGAGGGTTCGGCCATCCTCTAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGA 14702095 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || || || || |||| || | |||| || || || || |||| Sbjct 14702096 GGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTTTCAACTGTGTCACTAGCCTCA 14702155 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || || || || || || ||||| |||||||| Sbjct 14702156 ACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 14702205 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || ||||| | || || |||||||| | || | ||||| || ||||||||| Sbjct 14701064 ATGCCTCCTCTAAGACGCAGGACCAGATGGAGGGTGGATTCTTTCTGGATGTTATAGTCG 14701123 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | | ||| || | || || || ||||| || | |||||| || |||||| Sbjct 14701124 GAGAGGGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGA 14701183 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || || || || |||| || | ||| ||| || || | |||| Sbjct 14701184 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCACTGGCCTCA 14701243 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||| || || || || ||||| || || || ||||| || ||||| Sbjct 14701244 ACCTCTAGGGTAATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 14701293 Score = 84.2 bits (92), Expect = 4e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || ||||||||||| || | ||||| || |||||||| || |||||||| || || || Sbjct 14702632 TGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCCTGGATC 14702691 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| || | ||| ||| || || | |||||| || || || || ||||| ||| Sbjct 14702692 TTGGCCTTCACATTGTCAATGGTGTCACTGGCCTCAACCTCAAGGGTAATGGTTTTGCCT 14702751 Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || ||||| Sbjct 14702752 GTGAGGGTCTTGACGAAGATCTGCAT 14702777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899591963984640