Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq50 203 2e-46 seq2 116 3e-20 seq6 91.5 1e-12 >seq50 Length=5617500 Score = 203 bits (224), Expect = 2e-46 Identities = 936/1464 (64%), Gaps = 26/1464 (2%) Strand=Plus/Minus Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 |||| ||| || ||||| || || ||||| | ||||| || || || | || || || Sbjct 141625 GCAGACACGTTCAGAATGCCGTTAGCATCGATGTCAAACGTTACCTCTACCTGTGGTACA 141566 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545 |||| ||||||| ||||| || | | ||| | |||||| || ||||| || Sbjct 141565 CCTCGGGGAGCAGGGGGGATACCCGTGAGCTCAAACTTGCCCAGAAGGTTGTTATCCTTG 141506 Query 281546 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 281605 || | || |||||||| | | || || || | | || || || || || Sbjct 141505 GTCATGGCTCTCTCACCCTCATATACCTGAATCAGCACACCTGGCTGGTTGTCAGAGTAT 141446 Query 281606 GTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 281664 || | || | ||||| | | || || || |||||||||| | || | | || Sbjct 141445 GTGGAGAAGA-TCTGGGTCTGCTTGGTGGGGATGGTTGTGTTTCGTTTGATTAGAGGCGT 141387 Query 281665 CATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 281724 ||| | ||||| || || || | ||| ||||| ||||||| || || | || | | Sbjct 141386 CATGACTCCACCTGCAGTCTCAATACCCAGAGACAGAGGAGCCACGTCCAGAAGCAGCAG 141327 Query 281725 ATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATA 281784 || ||| | || || ||| | ||| | || ||||| || || | | |||||| | Sbjct 141326 ATCTTGGACATTCTCTGAAGTATCACCCATGAGGATAGCAGCCTGGACCGATGCACCACA 141267 Query 281785 TGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TG 281843 || ||||||||||| ||||| | | | || |||| | | ||||| ||||| | || Sbjct 141266 GGCTACAGCTTCATCTGGATTGATGCTCTTGTTCAGTTCTCTGCCATTAAAAAAGTCCTG 141207 Query 281844 AAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 281902 || ||| | ||| | || ||||| | | || || ||||| | ||||||||||| Sbjct 141206 CAA-AAGCT-TCTGGATTTTGGGAATTCTCGTAGAGCCACCAACCAGAACAATTTCATGA 141149 Query 281903 ACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCT 281962 | || || |||||||| || | ||| | | || ||||| || || || | Sbjct 141148 ATCTTGGACTTATCCAGCTTGGCATCTTGCAGGGCCTTCTCAACTGGCTCCAGCGTTCCC 141089 Query 281963 CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAA--GAG-TGACATTATAA 282019 || || | || || |||||||| || || || |||| ||| || || || Sbjct 141088 CTGAAAAGCTCCGAGTTGAGTTCTTCAAACCGTGCCCTCGTAATGGAGGTG----TAGAA 141033 Query 282020 -TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 282078 ||||| || || |||| |||||| | ||||| ||| || || || || || | Sbjct 141032 GTCAATGCCCTCAAACAGAGAATCGATCTCAATACTAGCCTGGGTGCTGGAGGACAGGGT 140973 Query 282079 ACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT--GATTC 282136 | || || | || || ||||| | || || | | ||| | || ||| | | Sbjct 140972 CCTCTTGGCTCTCTCGCAAGCTGTGCGCAGCCTCCTCACAGCTCT--CTTATTTTGGCTG 140915 Query 282137 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTAT 282194 | || | || | ||||||||| || || |||||| | ||| |||| | | || | Sbjct 140914 ATGTCCTTCTTGTGTTTTCTCTTAAATTCCTCAACAAA--ATGGTTTACCATCCTGTTGT 140857 Query 282195 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCAT 282254 |||| || || || || | | || | |||| || ||| | || | || | |||| Sbjct 140856 CAAAGTCCTCCCCGCCAAGATGTGTGTCACCTGCTGTGGCTTTCACCTCAAATATACCAT 140797 Query 282255 CTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT 282314 | |||| | | | | |||||| || || ||||| | ||||| || || || | Sbjct 140796 CCTCAATGGTAAGGATGGATACATCAAAAGTGCCTCCACCAAGGTCAAAGATGAGCACGT 140737 Query 282315 TCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 282374 | ||| | || |||||| | |||||| |||| || || || || || || | Sbjct 140736 TGCGCTCTCCCTTTTTTCCTTTATCCAAACCATAAGCAATGGCTGCTGCTGTGGGCTCGT 140677 Query 282375 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 282434 | || || |||| |||||| || |||| || || || || || ||||||||||| | Sbjct 140676 TGATGATCCTCAGAACATTCAGTCCAGAGATCACCCCGGCGTCCTTGGTGGCTTGTCTCT 140617 Query 282435 GTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATAT 282494 | || || || ||||| || ||||| || || || |||| || ||| || | || Sbjct 140616 GGGAGTCATTGAAATAAGCTGGAACTGTGATGACTGCATTTGACACT-CTCTGCCCCAGG 140558 Query 282495 AAGCGCTT-GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAA 282553 ||| || || | | ||||||||| | | ||| || || || | ||||| | Sbjct 140557 AAGGCCTCAGCAATCTCTTTCATTTTTACCAGGACCATGGAGGAGATCTCCTCTGGGTAG 140498 Query 282554 TATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATA 282613 | ||||| || || ||| || | | | || | | | |||| || Sbjct 140497 AAGGCCTTGGTCTCCCCTTTATACTCCACCTGTACTTTGGGCCTTCCATTATCATTGATC 140438 Query 282614 ACTTTAAATGGCCAATATTTCATATCTGATTGAAC-ACTTTGGTCATTAAAATCTCTACC 282672 || ||||| ||||| |||||| || || || || |||||| || ||||| | |||||| Sbjct 140437 ACCTTAAAAGGCCATAGTTTCATGTCGGACTGGACTACTTTG-TCGTTAAACTTTCTACC 140379 Query 282673 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGC 282732 || | ||||| || ||||| || || ||||| || || | ||| | || | ||||| Sbjct 140378 GATGAGCCGTTTGGCGTCAAAGATTGTGTTGGTGGGGTTCATGGCAACCTGGTTCTTGGC 140319 Query 282733 TGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATT 282792 ||||||||||| || || || || ||||| | ||||| ||||| || | || Sbjct 140318 AGCATCTCCAATGAGCCTCTCAGTGTCAGTAAAGGCCACATAGCTGGGAGTGGTCCTGTT 140259 Query 282793 ACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAA 282852 || ||||| || ||||| || |||||||| || | || | || |||||||| | Sbjct 140258 GCCCTGATCGTTAGCAATGATCTCAACTTTGCCGTGCTGGAAAACCCCTACACATGAGTA 140199 Query 282853 AGTTGTTCCTAAATCAATACCAAT 282876 || || || |||||||| || || Sbjct 140198 GGTGGTACCCAAATCAATGCCGAT 140175 >seq2 Length=17630497 Score = 116 bits (128), Expect = 3e-20 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || || ||||| |||| |||||||||||||||||||||||| || | | ||| Sbjct 8353884 TTTTTGTCCAGGCCATAAGCAATAGCAGCAGCAGTTGGTTCATTAATGATACGAAGGACA 8353825 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || || |||| ||| | || |||||||| ||||| || | ||||| || ||||| || Sbjct 8353824 TTCAGGCCAGAAATGGTCCCCGCATCTTTGGTGGCCTGGCGCTGTGAGTCATTAAAGTAG 8353765 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTAC 282480 ||||| ||||| | || |||| ||| || Sbjct 8353764 GCAGGCACAGTCACTACAGCATTTGTGAC 8353736 >seq6 Length=17716291 Score = 91.5 bits (100), Expect = 1e-12 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 282368 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 282427 || ||||| || ||||||| |||||| |||||||| || |||| ||||| |||||||| Sbjct 2160862 GGCTCATTGATGATTCTCATAACATTCAGACCAGCGATGGTTCCGGCATCCTTAGTGGCC 2160803 Query 282428 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTAC 282480 || | || | ||| || || |||||||||||||| | || |||| ||| || Sbjct 2160802 TGGCGCTGGGCATCATTGAAGTATGCAGGAACAGTGACCACAGCATGTGTAAC 2160750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740357820262752