Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq31 179 4e-40 seq32 122 1e-22 >seq31 Length=8019404 Score = 179 bits (198), Expect = 4e-40 Identities = 577/883 (65%), Gaps = 22/883 (2%) Strand=Plus/Minus Query 162120 ATCGAACTTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCGA 162179 ||||||||| || ||||| ||||| || | || || | ||| | ||||||| Sbjct 4772224 ATCGAACTTATTGGCGAAGAGGTGTCGCT-GATC--CAGGAGCCACCGGATGTCCCCCGT 4772168 Query 162180 TCCGAACACGCACACGGACCGCACGTGCACG--CCGCTGCACGGCGGATACAGGGCCCCA 162237 |||| |||||||||| | | | | || ||| ||| |||||||| ||| |||||||| Sbjct 4772167 TCCGTACACGCACACCG--CTCTCCTGTACGTCCCGGTGCACGGCTCGTACGGGGCCCCA 4772110 Query 162238 TCGTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCG 162297 | ||| || || | | || |||||| || || | |||||||||||| Sbjct 4772109 CGGATCACCTCACCTGCCAAATAGCTCCACTTCACAGCCCGCACCACGGCCTGCATGTCG 4772050 Query 162298 GAGGTGTCGTACTTGTACACTGACGGCACGGCTCCAGGAACACCCGGCAGTCTCTGTAGA 162357 || ||||||||||| | |||| || || || || |||| ||||| ||| Sbjct 4772049 GACGTGTCGTACTTAATGTTGGTGGGCAGGGACCCGGGCACGGAGGGCATCCTCTGCAGA 4771990 Query 162358 GTAGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTG 162417 || ||||||||||| || || || || ||||| |||||| |||||||| | || || Sbjct 4771989 GTCGCCCACAGGTGCTCATCCGGGCTGTACGTGTCCTTCTCCCACTCCAGAAGCTTCCGA 4771930 Query 162418 ACCGTTTTATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTA 162477 ||| ||| | || | | | || ||| ||| || ||| || || || | Sbjct 4771929 ACCTCCGCATCCTTCAGCACATGACCCACAAAGGCCCTCGTGACAGCGAAATAGGCATTT 4771870 Query 162478 CCAGAAAACACGGGTATGCGTATAGGAGG-GGGCTCTTTGTCTTGACCCGTGTTGACTAC 162536 || || |||| ||| ||| |||||| || ||||| || | | ||| |||| || Sbjct 4771869 CCCGAGAACATGGGGGTGCTTATAGGCGGCGGGCTTTTCCGCACG-TTCGTCCTGACGAC 4771811 Query 162537 CATTCCCTCTACGACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTAGACG--GG 162594 | | ||| ||| | | ||| | | ||||| ||| || || Sbjct 4771810 GGT---GTTGGTGACGTTGTGATGATACTGCCAGCGCTGCTTCTTA----TAGTCGTTGG 4771758 Query 162595 TG--TTCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTA 162652 || |||||||| | ||||| | |||| | |||||||||| | ||||||||| Sbjct 4771757 TGATCTCGGTCTCCATGCTGTTCTGGCCCCTGAGGGCCTTCAGCGCCTGGACCATCTCTC 4771698 Query 162653 GATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAA-CG 162711 |||||||| | ||| |||||||| |||||| || | | || ||||||||| | Sbjct 4771697 TGTTGGTCTTGATGGGGAAGTCGGTCCCGCAGGTGTTTAGCAAGTACCTCCACTTAATCT 4771638 Query 162712 CTGAGTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCG 162771 |||| | |||||| | | |||||||| ||| ||||| || || |||||| ||| Sbjct 4771637 GCGAGTTC-AGCAGATCTTTCATACAGTTCAAATCTGCCTGCACCCGGGACCACGAGGCG 4771579 Query 162772 TACACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCC 162831 ||||| || || || || || ||||| | || || || || || || || ||| || Sbjct 4771578 TACACCACACTTTCTAATCTGGTGGCTATGAACACGTTAGGAAAGCAGGAGACGATCGCC 4771519 Query 162832 ATCACGGCCAGTGAGAACATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTC 162891 ||| ||| |||| | | || |||| | ||| |||||||| | |||| Sbjct 4771518 TCCACAGCCGCCTTGAACTCTTCATTGGACTTTTTATCCAGGTGCACGCAGTAGATATTC 4771459 Query 162892 TGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACG 162951 || || ||||| |||| | ||| | || ||| |||||||| |||| | || | ||| Sbjct 4771458 TGGGGCGCGTAAATGGAGCGCAGGAGTCGCTCAAACATCTCGATCTGCTCATGGATCACC 4771399 Query 162952 ATAGAATACGCTATGGGGAACTCAGCCTCCTCGCGACTGAGAG 162994 || || || || |||||||| || |||||| |||||||| Sbjct 4771398 ATGGAGTAAGCGATGGGGAAGTCTCTCTCCTCTACACTGAGAG 4771356 >seq32 Length=14693680 Score = 122 bits (134), Expect = 1e-22 Identities = 346/516 (67%), Gaps = 27/516 (5%) Strand=Plus/Plus Query 176968 AGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAATTTTCGTAATTCTCTCTCGATG 177027 |||||| |||||| ||||||||||| ||| ||| | || ||||| |||| || | | Sbjct 1030699 AGTCGTCCACGTGGATGAAAGCGTCGCCCCGGATAAAGTTCTCGTAGTTCTGCCTGGGCG 1030758 Query 177028 TTCCGAGTACTATGGGTACCGCACCTGCC-ATAAGAGATCGGTAGAGTTTTTCGGTAATA 177086 ||||| || | || || | || | | | | ||| | || |||||||| ||||| Sbjct 1030759 GGCCGAGAACCACTGGCACTGTCCCCACAGACAGGGGATTG-TACAGTTTTTCAGTAATG 1030817 Query 177087 TAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGAATTTACAGGAAGATAGTAGCG-- 177144 |||||| |||| | |||||||||||| | || ||||| |||| || ||| | || Sbjct 1030818 TAGTCCTTGTGGATGGAGTTCTCAAAGGACAGGTAGAACTTAC----AGCTAGCAACGGT 1030873 Query 177145 --GGATGAAGTCATCATCGGGTATATAATCTCCTACTACGTTCCCGTATACATGTATATC 177202 ||| |||| | || | || | || || | | ||||| || |||| | || Sbjct 1030874 TTGGACATAGTCTTTGTCAGACATGTGCTCCCCGAAGGCTTTCCCATACGCATGGACCTC 1030933 Query 177203 TATGTGTTTACTGAGCTCTAGGTAGTATCTCGATCTCACGTGGTCGTTGTTCCAATTGCT 177262 |||||||| ||||| ||||||| || | ||| || || | |||||| ||||| Sbjct 1030934 AATGTGTTTGTACAGCTCATTGTAGTATTTCACCCGCACATGTTCCTGGTTCCAGTTGCT 1030993 Query 177263 GACGACCCAGCAAACTAACTTGCTCTTTGCGGGAACGGGATTCGA--TACTAATGCAGTG 177320 || | |||||| || | ||| || ||||| || |||| ||| | || | || | Sbjct 1030994 CACAATCCAGCAGACCAGCTT-CTTTTTGCTGG-GTGGGA--CGAAGTCCTCCT-CA-TC 1031047 Query 177321 TCTCTGAGCGTT---AGTGATCCATAGGGCACGTGAATATCCGAGTCGCGTCTGTACGTT 177377 | |||||| ||| || || ||||| ||||| | || || | || | | ||| | Sbjct 1031048 T-TCTGAG-GTTATGAGGGACCCATAAGGCACTTTGATGTCAGCATCCTGACGGTAACTC 1031105 Query 177378 AACGTGAGATTGAAAAGGTTTTCTATACCTTG--TTTGAAGGGGCTGTTACTGGGCGATT 177435 | || |||||| |||| || || || | | || || ||| || ||||| | Sbjct 1031106 AGAGTCGCATTGAACAGGTGCTCCATCCCAGGGATCTGGGAGGAGTGTGAC--GGCGACT 1031163 Query 177436 CTAAGTTCATCCATATCCACTTTTGAAAGGTTGGTC 177471 | |||||||||||||||||||| ||||||| |||| Sbjct 1031164 CCAAGTTCATCCATATCCACTTCTGAAAGGGGGGTC 1031199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578391856819200