Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2 163 3e-35 seq6 89.7 5e-13 >seq2 Length=17630497 Score = 163 bits (180), Expect = 3e-35 Identities = 785/1229 (64%), Gaps = 38/1229 (3%) Strand=Plus/Minus Query 146938 TTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTA 146997 ||||| ||| | | |||| ||||| || ||||| | || ||||| |||| ||||| Sbjct 6622608 TTGCTGGTGTAGGCTTCAATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCGGTG 6622549 Query 146998 GGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAA- 147056 ||||| |||| || || || | || |||| | ||| || ||||| | Sbjct 6622548 GGCATCGGGGCCAGCAGCAGACTGTTCCTCACCCCGTGCTTGGCGATCTTTTCCTTGAGC 6622489 Query 147057 AGTTTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCC 147116 || || ||||||||||| | | ||||||| | |||||||||||||||||| | || Sbjct 6622488 AGCTT-CCAGTCCCACAGCTTGGTGGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCC 6622430 Query 147117 TCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCG-CCAATTCAC 147175 ||| |||| ||| || | || |||| ||| || | ||| ||| || | Sbjct 6622429 CTTGCTGACGGGGGAGCCTTCGTATGTCTCGTAGGGGCCGA-GCTCGGCGGCCAGCTCGC 6622371 Query 147176 AGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCG 147235 |||| |||| || || ||||||| ||||| || |||||| |||| || | || Sbjct 6622370 AGCTGCCCTCCAGGGCGGCATAGTAGATGGTCTCAAAGATTTGAATGTTCAGCAGCTGCG 6622311 Query 147236 CTTCTTCGCTCTCGTAAGGCAT-ACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATA 147294 | || ||| ||| || || | ||||| || | |||| || |||||||| |||| | Sbjct 6622310 CCTCAGGGCTTTCG-AATGCGTGACGCATGAGGATGAAGGTGTCTGCCAAACCTTGGACA 6622252 Query 147295 CCGACGCCGATAGGTCGATGCTTTTCGTTG--CTGCGCTTCGCGCTCGCTATGGGATAGT 147352 |||| || || || || || | |||| || | || | | | || |||| ||| Sbjct 6622251 CCGATTCCTATTGGCCGGTGACGCTTGTTGGACTTCTCTGC-CTCAGGCACTGGG-TAGA 6622194 Query 147353 GGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTT 147412 ||| ||| || |||||||| | || || | ||||| || | |||| Sbjct 6622193 AGTTAATATCTATGATCTTGTTCAAATTTTTGACAATTACTTTGGTCACATAAGCTAGTT 6622134 Query 147413 TCTCGAAATCATAAGTCCCGTCTTCGAC-ACGTACGCATTGGTTCACGGCGATAGACGCC 147471 | | || ||| |||||| ||| | || ||| || ||| | ||||| || ||| Sbjct 6622133 TTTTAAAGTCAAAAGTCCGCTCTGGGGTGACATAC--AT--GTTGAGTGCGATTGAGGCC 6622078 Query 147472 AGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTG 147531 ||||| |||||||| ||| || || | |||||| | |||||| | |||||||||| Sbjct 6622077 AGATTACAGACGGCGACCTCGTCACCGCTGGTGTACTCAATGATTTCTGTGCACAGGTTG 6622018 Query 147532 CTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAG 147591 |||| || ||| |||| || || || ||||| |||| ||||| | ||||||| || Sbjct 6622017 CTGCTCTTGATGGTGCCCAGGTTCTGATGGTTGCTCTTCCTGTTGCAGGAGTCTTTGTAG 6621958 Query 147592 AGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT--------AAACCTATGCA 147643 |||||||| || ||| || || || | |||| ||| ||| | ||| Sbjct 6621957 AGCATGTATGGCGTGCCAGTTTCCGTCTGGGACTCAATGATGGCGTGCCAAAGC--TGCT 6621900 Query 147644 GGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACC 147703 | ||| | | ||| |||| | ||||| || || || || ||| | | Sbjct 6621899 GAGCCTTCAC---CACACGCTTC---ACCCGGCCTTCTTTCTCATATGAGGTGTAGAGCT 6621846 Query 147704 GCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCG 147763 ||| ||||| || || |||| ||| | || ||||| || | | ||||||||||| | Sbjct 6621845 TCTCGAACTCCTCCCCCCAGCACTCGTCCAGCCCGGGGCATTCGTTTGGACACATCAGAG 6621786 Query 147764 ACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACA 147823 |||| |||| | | || | ||| ||||| || || | |||||| ||||| | Sbjct 6621785 ACCAGTCCTCGTTGGTCTCCACCCTCTTCATGAACAGGTCGGGGATCCACAGGGCGTAGA 6621726 Query 147824 TAAGATCGC--GCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCT 147881 || || | || || ||| ||||| || |||| |||| | || | | Sbjct 6621725 AGAGGTCTCTGGCCCTCTGC--TCCTCCTTTCCTGTGTTTTTCTTCAGCTCCAGGAAGTC 6621668 Query 147882 ATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCC 147938 | | | || ||||||||| || | ||| | ||| | || || | | || || Sbjct 6621667 AAACACATCAAAGTGCCAGGGCTCCAAGTACATGGCGAAAGCTCCGGGCCTCTTGTTGCC 6621608 Query 147939 GCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCT 147998 |||||||||||| | ||| || ||||||| |||| | || |||||| | || || | Sbjct 6621607 GCCCTGGTCGACGTACCGCGCCGTGTTGTTGTACACTCTCAGCATGGGGACTAGACCATT 6621548 Query 147999 CGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAAC 148058 | ||||||||||| ||| | ||| || | ||| | | || || Sbjct 6621547 GGAGTTGCCGTTGGTGCCGGCGATGTAGCTCCCTGTTGATCGGATGCAGCTGACTGCCAC 6621488 Query 148059 GCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCC 148118 ||| || || ||| | |||| || ||| ||||| | || ||| ||| || || Sbjct 6621487 GCCGATTCCTCCGGCCGACTTGGAGATGAGGGCGCACTGCTTCAGTGTATCGTAAATCCC 6621428 Query 148119 GTCGATGCTGTCGTTTTTGACGCCAAGCA 148147 ||||||||||||| ||| | | | |||| Sbjct 6621427 CTCGATGCTGTCGTCTTTCATGGCGAGCA 6621399 >seq6 Length=17716291 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || ||||||||||| | ||| || |||||| ||||| || |||| | Sbjct 10619637 GACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCA 10619696 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || ||| | || ||||| || ||||| || || |||| Sbjct 10619697 AAGATCAGACGCTGCTGGTCTAGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACG 10619756 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | |||||||| || | || | || || |||||||| || || Sbjct 10619757 TTCTCAATGGTCTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGCGTCTTG 10619816 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 10619817 ACGAAGATCTGCAT 10619830 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || ||||||||||| | ||| || |||||| ||||| || |||| | Sbjct 10619865 GACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCA 10619924 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || ||| | || ||||| || ||||| || || |||| Sbjct 10619925 AAGATCAGACGCTGCTGGTCTAGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACG 10619984 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | |||||||| || | || | || || |||||||| || || Sbjct 10619985 TTCTCAATGGTCTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGCGTCTTG 10620044 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 10620045 ACGAAGATCTGCAT 10620058 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || ||||||||||| | ||| || |||||| ||||| || |||| | Sbjct 10620093 GACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCA 10620152 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || ||| | || ||||| || ||||| || || |||| Sbjct 10620153 AAGATCAGACGCTGCTGGTCTAGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACG 10620212 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | |||||||| || | || | || || |||||||| || || Sbjct 10620213 TTCTCAATGGTCTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGCGTCTTG 10620272 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 10620273 ACGAAGATCTGCAT 10620286 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || ||||||||||| | ||| || |||||| ||||| || |||| | Sbjct 10620321 GACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCA 10620380 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || ||| | || ||||| || ||||| || || |||| Sbjct 10620381 AAGATCAGACGCTGCTGGTCTAGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACG 10620440 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | |||||||| || | || | || || |||||||| || || Sbjct 10620441 TTCTCAATGGTCTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGCGTCTTG 10620500 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 10620501 ACGAAGATCTGCAT 10620514 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || ||||||||||| | ||| || |||||| ||||| || |||| | Sbjct 10620549 GACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCA 10620608 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || ||| | || ||||| || ||||| || || |||| Sbjct 10620609 AAGATCAGACGCTGCTGGTCTAGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACG 10620668 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | |||||||| || | || | || || |||||||| || || Sbjct 10620669 TTCTCAATGGTCTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTG 10620728 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 10620729 ACAAAGATCTGCAT 10620742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476578123182720