Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq33 114 1e-20 seq3 114 1e-20 seq6 104 2e-17 seq51 93.3 4e-14 >seq33 Length=5647056 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 6175 TCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 6116 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | || | || |||||||||| |||||| ||||| | || Sbjct 6115 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTT 6056 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||||| ||||| || || || |||| || || ||| Sbjct 6055 TCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACA 5996 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 5995 AAGATCTGCAT 5985 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || ||||| || || | | ||| || | || ||||||||||| || ||||| Sbjct 11985 TCTTTCTGGATGTTATAGTCAGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAG 11926 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || |||||| || | || | || |||||||||| |||||| ||||| | | Sbjct 11925 ATCAGCCTCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTC 11866 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||||| | ||| ||||||| ||||| || || || |||| || ||||| Sbjct 11865 TCAATGGTGTCGCTGGGTTCAACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACG 11806 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 11805 AAGATCTGCAT 11795 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 6403 TCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 6344 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || |||||||| | || | || |||||||||| |||||| ||||| || Sbjct 6343 ATCAGCCTTTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTT 6284 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||||| ||||| || || || |||| || || ||| Sbjct 6283 TCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACA 6224 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 6223 AAGATCTGCAT 6213 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 6859 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 6800 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || |||||||| | || | || ||||||||| |||||| ||||| || Sbjct 6799 ATCAGCCTTTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTT 6740 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||||| ||||| || || || |||| || || ||| Sbjct 6739 TCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACA 6680 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 6679 AAGATCTGCAT 6669 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 11757 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 11698 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | || | | ||||||||| |||||| ||||| | || Sbjct 11697 ATCAGCCTCTGCTGGTCAGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTT 11638 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||| | ||||| || || || |||| || || ||| Sbjct 11637 TCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACA 11578 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 11577 AAGATCTGCAT 11567 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 6631 TCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 6572 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || |||||||| | || | || ||||||||| |||||| ||||| || Sbjct 6571 ATCAGCCTTTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTT 6512 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||||| ||||| || || || |||| || || ||| Sbjct 6511 TCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACA 6452 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 6451 AAGATCTGCAT 6441 >seq3 Length=24902066 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| || | | |||||| | || |||||||||||||| ||||| Sbjct 14701331 TCTTTCTGGATGTTGTAGTCAGAGAGGGTTCGGCCATCTTCCAGCTGCTTACCAGCAAAG 14701390 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | |||| || ||||||||| |||||| |||| | | Sbjct 14701391 ATCAGCCTCTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGGATCTTGGTTTTCACATTC 14701450 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | || ||||| || | || ||||| | ||||| || || || |||| || || ||| Sbjct 14701451 TCAACAGTGTCACTGGCCTCAACCTCTAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACA 14701510 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 14701511 AAGATCTGCAT 14701521 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || ||||| ||||||||||| | | ||| || | || || |||||||| || ||||| Sbjct 14702359 TCTTTTTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAG 14702418 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | |||| || ||||||||| |||||| ||||| | Sbjct 14702419 ATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGTCTTCACGTTC 14702478 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 |||| |||||||| | || ||||| | ||||| || || || || | || || || Sbjct 14702479 TCCACAGTGTCGCTGGGCTCTACCTCAAGAGTGATGGTCTTGCCTGTGAGGGTCTTGACG 14702538 Query 35726 AATATCTGCAT 35736 || || ||||| Sbjct 14702539 AAAATTTGCAT 14702549 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || ||||| ||||||||||| | | ||| || | || || |||||||| || ||||| Sbjct 14702587 TCTTTTTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAG 14702646 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | ||||| || || |||||| |||||| ||||| | | Sbjct 14702647 ATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCCTGGATCTTGGCCTTCACATTG 14702706 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||| | || || ||||| || || | || || || Sbjct 14702707 TCAATGGTGTCACTGGCCTCAACCTCAAGGGTAATGGTTTTGCCTGTGAGGGTCTTGACG 14702766 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 14702767 AAGATCTGCAT 14702777 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || ||||| || |||| | ||| || | || ||||||||||| || ||||| Sbjct 14701103 TCTTTCTGGATGTTATAGTCGGAGAGGGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAG 14701162 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| | ||||||||| | ||||| || ||||||||| |||||| ||||| | | Sbjct 14701163 ATCAGTCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTG 14701222 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||| | || || || || || || | || || ||| Sbjct 14701223 TCAATGGTGTCACTGGCCTCAACCTCTAGGGTAATGGTCTTGCCTGTGAGGGTCTTGACA 14701282 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 14701283 AAGATCTGCAT 14701293 >seq6 Length=17716291 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || | || || |||||||| || ||||| Sbjct 10620551 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAA 10620610 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| || | || |||||| ||| |||||| ||||| | Sbjct 10620611 GATCAGACGCTGCTGGTCTAGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTT 10620670 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || ||||| | |||||||||| ||||| || || || |||| || || || Sbjct 10620671 CTCAATGGTCTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTGAC 10620730 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 10620731 AAAGATCTGCAT 10620742 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || | || || |||||||| || ||||| Sbjct 10619639 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAA 10619698 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| || | || |||||| ||| |||||| ||||| | Sbjct 10619699 GATCAGACGCTGCTGGTCTAGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTT 10619758 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || ||||| | |||||||||| ||||| || || || |||| || || || Sbjct 10619759 CTCAATGGTCTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGCGTCTTGAC 10619818 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 10619819 GAAGATCTGCAT 10619830 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || | || || |||||||| || ||||| Sbjct 10619867 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAA 10619926 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| || | || |||||| ||| |||||| ||||| | Sbjct 10619927 GATCAGACGCTGCTGGTCTAGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTT 10619986 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || ||||| | |||||||||| ||||| || || || |||| || || || Sbjct 10619987 CTCAATGGTCTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGCGTCTTGAC 10620046 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 10620047 GAAGATCTGCAT 10620058 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || | || || |||||||| || ||||| Sbjct 10620095 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAA 10620154 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| || | || |||||| ||| |||||| ||||| | Sbjct 10620155 GATCAGACGCTGCTGGTCTAGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTT 10620214 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || ||||| | |||||||||| ||||| || || || |||| || || || Sbjct 10620215 CTCAATGGTCTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGCGTCTTGAC 10620274 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 10620275 GAAGATCTGCAT 10620286 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || | || || |||||||| || ||||| Sbjct 10620323 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAA 10620382 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| || | || |||||| ||| |||||| ||||| | Sbjct 10620383 GATCAGACGCTGCTGGTCTAGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTT 10620442 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || ||||| | |||||||||| ||||| || || || |||| || || || Sbjct 10620443 CTCAATGGTCTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGCGTCTTGAC 10620502 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 10620503 GAAGATCTGCAT 10620514 >seq51 Length=6925267 Score = 93.3 bits (102), Expect = 4e-14 Identities = 91/115 (79%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 44304 GTAGGATGTATGTGGTCCATTTGCGGTGTCCACGAC-AGGGCGTGGCGAGAGCTACCCAT 44362 ||||| ||||||||||| ||||| || |||| ||| ||||| ||| |||| |||||| Sbjct 6812462 GTAGGTTGTATGTGGTCTATTTGTGGAATCCATGACCAGGGCTGGGC-AGAGAGACCCAT 6812404 Query 44363 CTACGGCAAAGTGCGCTACATGAACTACAACGGTTGCGTCAGAAAGTTTGATGTA 44417 | ||| || | ||||||||||||||||| |||||| | | |||||||| ||| Sbjct 6812403 TTTCGGGAAGATCCGCTACATGAACTACAAAGGTTGCCTTCGGAAGTTTGACGTA 6812349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450762314924160