Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2 315 1e-80 seq18 104 3e-17 seq4 91.5 2e-13 >seq2 Length=17630497 Score = 315 bits (348), Expect = 1e-80 Identities = 869/1329 (65%), Gaps = 5/1329 (0%) Strand=Plus/Minus Query 68652 ATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATT 68711 |||||| || || || ||||||| ||||||||| | || | || ||||| ||||| Sbjct 6622711 ATTCTTCATATCTTCGTTCCACAGCCCTCTCTCCGTCAGGTCTTTGAGCAGATGGGGATT 6622652 Query 68712 AACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTC 68771 ||||| || || || || || | || || || ||||| || || ||||| || | ||| Sbjct 6622651 CACTATCTGGAACTCTCCGGAGAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTC 6622592 Query 68772 CACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAA 68831 | || || || || ||||| || || || || || || || ||||| || |||| || Sbjct 6622591 AATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCGGTGGGCATCGGGGCCAGCAG 6622532 Query 68832 TAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAG 68891 | ||| || || | || || | ||| || || || || | ||||| ||||| || Sbjct 6622531 CAGACTGTTCCTCACCCCGTGCTTGGCGATCTTTTCCTTGAGCAGCTTCCAGTCCCACAG 6622472 Query 68892 ATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCC 68951 | | || | ||| | ||||| || || || || || || | || || Sbjct 6622471 CTTGGTGGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTGCTGACGGGGGAGCC 6622412 Query 68952 ATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACC 69011 | ||||| || || || || || | || || || || || |||| | || | Sbjct 6622411 TTCGTATGTCTCGTAGGGGCCGAGCTCGGCGGCCAGCTCGCAGCTGCCCTCCAGGGCGGC 6622352 Query 69012 GTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGG 69071 || || || || || || || | | || || || || || | || ||||||| Sbjct 6622351 ATAGTAGATGGTCTCAAAGATTTGAATGTTCAGCAGCTGCGCCTCAGGGCTTTCGAATGC 6622292 Query 69072 ATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATG 69131 | | | | || || || | |||||||| || || || || || || || || | || Sbjct 6622291 GTGACGCATGAGGATGAAGGTGTCTGCCAAACCTTGGACACCGATTCCTATTGGCCGGTG 6622232 Query 69132 TCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT 69191 | ||| || || | || || || || | || || | ||||||||||| || || || Sbjct 6622231 ACGCTTGTTGGACTTCTCTGCCTCAGGCACTGGGTAGAAGTTAATATCTATGATCTTGTT 6622172 Query 69192 AAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCC-AT 69250 | |||| ||| | |||||| ||| | |||||| ||| ||||| |||| | Sbjct 6622171 CAAATTTTTGACAATTACTTTGGTCACATAAGCTAGTTTTTTAAAGTCAAA-AGTCCGCT 6622113 Query 69251 CT---ATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAG 69307 || | ||| |||| || ||||| | || || |||||||| || || ||||| | | Sbjct 6622112 CTGGGGTGACATACATGTTGAGTGCGATTGAGGCCAGATTACAGACGGCGACCTCGTCAC 6622053 Query 69308 AATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTT 69367 | | || | || || ||||| || || || || | ||||| || ||||| || | Sbjct 6622052 CGCTGGTGTACTCAATGATTTCTGTGCACAGGTTGCTGCTCTTGATGGTGCCCAGGTTCT 6621993 Query 69368 GCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAA 69427 | || || ||||| |||| |||| ||| ||||| || || | || || |||||||| Sbjct 6621992 GATGGTTGCTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTATGGCGTGCCAGTTTCCG 6621933 Query 69428 TCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCT 69487 |||| || || || || | | ||||| | ||| || | || ||| || Sbjct 6621932 TCTGGGACTCAATGATGGCGTGCCAAAGCTGCTGAGCCTTCACCACACGCTTCACCCGGC 6621873 Query 69488 TCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATC 69547 ||||| |||||| || || ||| ||||| || || ||||| || |||| | Sbjct 6621872 CTTCTTTCTCATATGAGGTGTAGAGCTTCTCGAACTCCTCCCCCCAGCACTCGTCCAGCC 6621813 Query 69548 CAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAA 69607 | || ||||| ||||||||||||| ||||| | || | || || | ||||| | Sbjct 6621812 CGGGGCATTCGTTTGGACACATCAGAGACCAGTCCTCGTTGGTCTCCACCCTCTTCATGA 6621753 Query 69608 ATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTG 69667 | || ||||| ||||| || || ||||| ||||||| || | || || ||||||| Sbjct 6621752 ACAGGTCGGGGATCCACAGGGCGTAGAAGAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTG 6621693 Query 69668 TAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCG 69727 | ||||| || || || || || || | | |||| | ||||| || || | || || | Sbjct 6621692 TGTTTTTCTTCAGCTCCAGGAAGTCAAACACATCAAAGTGCCAGGGCTCCAAGTACATGG 6621633 Query 69728 CCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGA 69787 | | |||| || | || || || ||||| || | ||| | || ||||| || || | Sbjct 6621632 CGAAAGCTCCGGGCCTCTTGTTGCCGCCCTGGTCGACGTACCGCGCCGTGTTGTTGTACA 6621573 Query 69788 CTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTC 69847 |||||||||| || | | |||||| || || || || || || | || || || ||| Sbjct 6621572 CTCTCAGCATGGGGACTAGACCATTGGAGTTGCCGTTGGTGCCGGCGATGTAGCTCCCTG 6621513 Query 69848 TTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCAC 69907 ||| || || || | | | || |||||||| ||| || ||||| || || | Sbjct 6621512 TTGATCGGATGCAGCTGACTGCCACGCCGATTCCTCCGGCCGACTTGGAGATGAGGGCGC 6621453 Query 69908 AACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAAC 69967 | | |||| ||| || || || ||||| ||||| || ||| ||||| || || || | Sbjct 6621452 ACTGCTTCAGTGTATCGTAAATCCCCTCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGC 6621393 Query 69968 AGCTAGACA 69976 |||| |||| Sbjct 6621392 AGCTGGACA 6621384 Score = 120 bits (132), Expect = 4e-22 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 68441 TCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATAT 68500 |||| |||||||| ||||| || || |||||| ||| |||| ||||| || ||||| | Sbjct 6623381 TCCAGCCGTAGAAGTGCATGCTGGTCAGTTTGCCATAGTTTGGCTCGGCGATGTGAATGT 6623322 Query 68501 TCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCT 68560 |||| || || || || |||||||| || || | ||| || ||||| || |||| | ||| Sbjct 6623321 TCATGGACTGGCTCTGGTCGATGAAGGCGCCACGATCAGCGGCCATCTTGATAACAGTCT 6623262 Query 68561 TTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAA 68611 | || | |||||||| | || ||| | | ||| || | ||||||||||| Sbjct 6623261 TCTGGGAGATTTCCCACACGGTTTTATACAGCTGCTTCAGATCATCTGGAA 6623211 >seq18 Length=14161719 Score = 104 bits (114), Expect = 3e-17 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 69321 TATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTT 69380 || |||||| || || ||||| || ||||||| || ||||| || ||||| |||||||| Sbjct 3645554 TACTATCTCCGTGCACAGATTGCTGGATTTGATGGTGCCCAGGTTCTGCTGGTTACTCTT 3645613 Query 69381 TTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGAT 69440 |||| |||||||||||||| || || |||| || || ||||| | ||||||||||| Sbjct 3645614 CCTGTTGCAGGCGTCCTTGTAGAGTATGTACGGTGTGCCCGTTTCTGTTTGAGATTCGAT 3645673 >seq4 Length=14220794 Score = 91.5 bits (100), Expect = 2e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||| || || || || | ||||| || | || || || ||||| || || || || | Sbjct 7897544 CCTCGTCCCTGCTGATCAGCTCGTTGGAGTAGGTAAGACCGGGCATCAGTCCCCGTTTCT 7897603 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 |||||||| | |||| ||| || || ||||| ||||||||||| || || ||||| |||| Sbjct 7897604 TGAGCCAATAGATGGAAGCGAAGGAGCCAGAGAAGAAGATGCCCTCCACCGCTGCGAATG 7897663 Query 39759 CAACAAGTCTCTC 39771 | || |||| ||| Sbjct 7897664 CCACGAGTCGCTC 7897676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686861128529280