Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq40 91.5 1e-13 seq699 82.4 6e-11 >seq40 Length=4141383 Score = 91.5 bits (100), Expect = 1e-13 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 77867 CTGACAAACGCCCAGGCATCTTGCTCTGTTGCAAACTTCTTAAATACGGCTGCTGGGAAT 77926 ||||| |||||||||||||||| ||||| | |||||||||| || ||||| || ||| Sbjct 4078699 CTGACGAACGCCCAGGCATCTTTCTCTGATCCAAACTTCTTGAAAGAGGCTGAAGGAAAT 4078758 Query 77927 TTGTCTACTTGGCTCTTACATTCATCCC 77954 ||||| || || ||||||||||||| || Sbjct 4078759 TTGTCCACCTGACTCTTACATTCATTCC 4078786 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 77311 CCAGACAACCTCCAGCTCCAAATTGAGTTGGTCCAGCTTCATAAAGTCATCCTTGTTGAC 77370 |||||| || ||||||||| || | |||||||||||| |||||||| |||||| Sbjct 4077012 CCAGACCACATCCAGCTCCGCGTTCAACCTGTCCAGCTTCATGAAGTCATCTTTGTTGGT 4077071 Query 77371 AACTGACCCTCCGCCATGCAGCCTCCAGCCGTTCTGCTTCCAGTTCTTAACCCACTTAGT 77430 | | ||||| | |||||||||| |||| ||||||| ||||| ||||| | || Sbjct 4077072 GATCGGGCCTCCAGATTTCAGCCTCCAGTTGTTCAGCTTCCACTTCTTCACCCAGCTGGT 4077131 Query 77431 CACACC 77436 |||||| Sbjct 4077132 CACACC 4077137 >seq699 Length=1473 Score = 82.4 bits (90), Expect = 6e-11 Identities = 108/150 (72%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 41049 ATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCA 41108 ||||| |||| || ||||| | |||||||| ||||| | | || || |||||| Sbjct 474 ATGGCTCTGCCGCCCTGTCACGCCCTGTGTCAGTTCTACGTGAGTGACGGCGAGCTGTCA 415 Query 41109 TGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGT 41168 ||||| |||| || | || || || ||||| || || || || || || || || || Sbjct 414 TGTCAGCTGTACCAGCGGTCGGGCGATATGGGCCTCGGAGTACCTTTCAATATCGCCAGC 355 Query 41169 TATGCTCTGCTCACGTATATGATTGCACAC 41198 ||||| || ||||| || ||||| |||||| Sbjct 354 TATGCACTCCTCACCTACATGATCGCACAC 325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397429106139760