Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2 197 2e-45 seq390 87.8 2e-12 seq73 87.8 2e-12 >seq2 Length=17630497 Score = 197 bits (218), Expect = 2e-45 Identities = 605/916 (66%), Gaps = 37/916 (4%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| ||| | ||||| | |||| | |||| ||||| |||| ||| ||||| |||||| Sbjct 6622614 TAGATGTTGCTGGTGTAGGCTTCAATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 6622555 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || |||||||| || |||| || || ||||| | | || | | || |||| Sbjct 6622554 GCGGTGGGCATCGGGGCCAGCAGCAGACTGTTCCTCACCCCGTGCTTGGCGATCTTTTCC 6622495 Query 118302 TTGAG-AGCGTCCCAGTCGTAGTTGAGCTTTGT---CTCCCCCTGCCACATATCAAACTG 118357 ||||| ||| ||| |||| | ||||| || | | || |||||| || |||| Sbjct 6622494 TTGAGCAGCTTCC-AGTCCCAC---AGCTTGGTGGGCGTCTTCTCCCACATGTCGTACTG 6622439 Query 118358 GAGGATACCTTGG--GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 118415 |||||| || | | |||| || || || || ||||||| || ||||| | | Sbjct 6622438 GAGGATGCCCTTGCTGACG--GGGGAGCCTTCGTATGTCTCGTAGGGGCCGAGCTCGGCG 6622381 Query 118416 GCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475 |||| ||| |||| |||| ||||| || | || || || ||||| || || ||| Sbjct 6622380 GCCAGCTCGCAGCTGCCCTCCAGGGCGGCATAGTAGATGGTCTCAAAGATTTGAATGTTC 6622321 Query 118476 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 118535 | || ||||| | || || ||| | || | || || || || | | Sbjct 6622320 AGCAGCTGCGCCTCAGGGCTTTCGAATGCGTGACGCATGAGGATGAAGGTGTCTGCCAAA 6622261 Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC---C 118592 ||||||||||||| || ||||| || || | | | || |||||| || ||| | Sbjct 6622260 CCTTGGACACCGATTCCTATTGGCCGGTGACGCTTGTTGGACTTCTCTGC---CTCAGGC 6622204 Query 118593 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 118652 || || || || || |||| || | | | || | ||||||| | || || || | Sbjct 6622203 ACTGGGTAGAAGTTAATATCTATGATCTTGTTCAAATTTTTGACAATTACTTTGGTCA-- 6622146 Query 118653 TCATGAAGCT--TTTCGTAA--TCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAG 118708 ||| ||||| ||| ||| |||||| | || |||| |||||||| | || Sbjct 6622145 -CAT-AAGCTAGTTTTTTAAAGTCAAAAGTCCG---CTCTGGGGTGACATACATGTTGAG 6622091 Query 118709 GGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 118768 |||||||| ||||||||||| || | | ||| || |||||||| || ||||| Sbjct 6622090 TGCGATTGAGGCCAGATTACAGACGGCGACCTCGTCACCGCTGGTGTACTCAATGATTTC 6622031 Query 118769 CGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACA 118828 ||||||| ||| ||||| |||||||||| ||||| || || ||| |||| || Sbjct 6622030 TGTGCACAGGTTGCTGCTCTTGATGGTGCCCAGGTTCTGATGGTTGCTCTTCCTGTTGCA 6621971 Query 118829 CGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTT 118888 | || ||||| |||||||||||||| || || ||||| ||||||| | || || | Sbjct 6621970 GGAGTCTTTGTAGAGCATGTATGGCGTGCCAGTTTCCGTCTGGGACTCAATGATGGCGTG 6621911 Query 118889 CCAGACATCGGCAGCTGGCA-CAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGT 118947 ||| | | ||| || || || || | || || |||| ||| || |||| Sbjct 6621910 CCAAAGCTGCTGAGCCTTCACCACACGC-TTCACCCGGCCTTCTTTCTCATATGAGGTGT 6621852 Query 118948 AGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAG 119006 |||| || ||||| || ||| | ||| ||||| || || || | ||| || Sbjct 6621851 AGAGCTTCTCGAACTCCTCCCCCCAGCACTCGTCCAGCCC-GGGGCATTCGTTTGGACAC 6621793 Query 119007 AAGAGAGACCATTGACCACCCT--CCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGA 119064 | |||||||| | || | | ||| |||| ||||||||| ||||| |||||||| | Sbjct 6621792 ATCAGAGACCA--GTCCTCGTTGGTCTCCACCCTCTTCATGAACAGGTCGGGGATCCACA 6621735 Query 119065 GCGCCGAGAAGAGATC 119080 | || ||||||| || Sbjct 6621734 GGGCGTAGAAGAGGTC 6621719 >seq390 Length=2268 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094 |||| || | | |||||| || || |||||| ||| || ||||| || || | ||||| Sbjct 2044 CCTCATCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 1985 Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 130154 ||| |||||| || ||| || || |||||||||||||| |||||||| ||||||| Sbjct 1984 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCGGCGAACG 1925 Query 130155 C 130155 | Sbjct 1924 C 1924 >seq73 Length=1910340 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094 |||| || | | |||||| || || |||||| ||| || ||||| || || | ||||| Sbjct 1745250 CCTCATCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 1745309 Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 130154 ||| |||||| || ||| || || |||||||||||||| |||||||| ||||||| Sbjct 1745310 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCGGCGAACG 1745369 Query 130155 C 130155 | Sbjct 1745370 C 1745370 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094 |||| || | | |||||| || || |||||| ||| || ||||| || || | ||||| Sbjct 1749142 CCTCATCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 1749201 Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 130154 ||| |||||| || ||| || || |||||||||||||| |||||||| ||||||| Sbjct 1749202 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCGGCGAACG 1749261 Query 130155 C 130155 | Sbjct 1749262 C 1749262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618392280597120