Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2 206 3e-48 seq4 102 1e-16 seq390 87.8 2e-12 seq73 87.8 2e-12 >seq2 Length=17630497 Score = 206 bits (228), Expect = 3e-48 Identities = 723/1108 (65%), Gaps = 33/1108 (3%) Strand=Plus/Plus Query 104603 GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTG 104662 ||| || |||| | || | ||||| |||||| ||| | | || ||||| ||| || Sbjct 6621623 GGAGCTTTCGCCATGTACTTGGAGCCCTGGCACTTTGATGTGTTTGACTTCCTGGAGCTG 6621682 Query 104663 CGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATT 104722 ||| ||| | |||||| | || | | || ||||||| ||| || ||||| Sbjct 6621683 AAGAAAAACACAGGAAAGGAGGAGCAGAGGGCCAGAGACCTCTTCTACGCCCTGTGGATC 6621742 Query 104723 CCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC 104782 || || || ||||||||||| || ||| | | | |||||||| | |||||| || Sbjct 6621743 CCCGACCTGTTCATGAAGAGGGTGGAGACCAACGAGGACTGGTCTCTGATGTGTCCAAAC 6621802 Query 104783 -AAGGCACCTGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGT 104840 || || || || || ||| ||| | ||| |||||||| || || ||||| | Sbjct 6621803 GAATGCCCCGGG-CTGGACGAGTGCTGGGGG-GAGGAGTTCGAGAAGCTCTACACCTCAT 6621860 Query 104841 ACGAGGAAGAAGGTCGGGCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATT 104899 | ||| ||||||| |||| || ||| |||| ||| | | ||| | || || Sbjct 6621861 ATGAGAAAGAAGGCCGGGTGAA-GCGTGTGGTGAAGGCTCAGCAGCTTTGGCACGCCATC 6621919 Query 104900 CTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAA 104959 | |||| || || || ||||| || ||||||||||| ||||||||| |||| ||| Sbjct 6621920 ATTGAGTCCCAGACGGAAACTGGCACGCCATACATGCTCTACAAAGACTCCTGCAACAGG 6621979 Query 104960 AAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTG 105019 ||||| || || |||| |||| |||||||| ||| || || ||||||||| | Sbjct 6621980 AAGAGCAACCATCAGAACCTGGGCACCATCAAGAGCAGCAACCTGTGCACAGAAATCATT 6622039 Query 105020 GAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAG 105079 || | || | || ||| || || ||||| || || |||||||| ||| || | Sbjct 6622040 GAGTACACCAGCGGTGACGAGGTCGCCGTCTGTAATCTGGCCTCAATCGCACTCAACATG 6622099 Query 105080 TATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAA---A 105136 ||||| |||||| ||| ||||| | | ||||||| | || || || | Sbjct 6622100 TATGTCACCCCAGAG---CGGACTTTTGACTTTAAAAAACTAGCTTATGTGACCAAAGTA 6622156 Query 105137 ACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACT 105193 | ||| |||||| | |||| | || |||| || || ||||| || |||| Sbjct 6622157 ATTGT---CAAAAATTTGAACAAGATCATAGATATTAACTTCTACCCAGTGCCTGAG--- 6622210 Query 105194 GCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGAT 105253 || || || || | | | ||||| ||||| || ||||||| || ||| | || || Sbjct 6622211 GCAGAGAAGTCCAACAAGCGTCACCGGCCAATAGGAATCGGTGTCCAAGGTTTGGCAGAC 6622270 Query 105254 GTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGC 105313 ||||| || || |||||||| || | || ||| || | || | Sbjct 6622271 ACCTTCATCCTCATGCGTCACGCATTCGAAAGCCCTGAGGCGCAGCTGCTGAACATTCAA 6622330 Query 105314 ATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGAT 105373 || ||||||||||| || | ||||| || |||| || | ||| |||| | | Sbjct 6622331 ATCTTTGAGACCATCTACTATGCCGCCCTGGAGGGCAGCTGCGAGCTGGCCGCCGAGCTC 6622390 Query 105374 GGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA-CAAGGG-GTGCTTCAATTTGATA 105431 || || || || || | || || |||| | ||| |||||| | || || | || | Sbjct 6622391 GGCCCCTACGAGACATACGAAGG--CTCCCCCGTCAGCAAGGGCATCCTCCAGTACGACA 6622448 Query 105432 TGTGG--GAAGGTG-AGACCAAGCTTCACTACGACTGGGAAGCT-CTCAAGGAACGCATC 105487 ||||| |||| | |||||||| | |||| ||||||| ||||||||| ||| Sbjct 6622449 TGTGGGAGAAGACGCCCACCAAGCT---GTGGGACT-GGAAGCTGCTCAAGGAAAAGATC 6622504 Query 105488 AAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCA 105547 || | || | | |||||||| || |||| || ||||| || ||||||||||| Sbjct 6622505 GCCAAGCACGGGGTGAGGAACAGTCTGCTGCTGGCCCCGATGCCCACCGCCTCCACCGCC 6622564 Query 105548 CAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGA 105607 || ||| |||| || || || | | ||||| ||||||| | |||||||| | || Sbjct 6622565 CAGATCCTGGGCAACAACGAGTCCATTGAAGCCTACACCAGCAACATCTACACCCGCAGG 6622624 Query 105608 ACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATT 105667 |||| | |||||||| ||| || || ||||| | | ||||| | |||| Sbjct 6622625 GTCCTCTCCGGAGAGTTCCAGATAGTGAATCCCCATCTGCTCAAAGACCTGACGGAGAGA 6622684 Query 105668 GGTCTCTGGTCCAAGGATATGAAGGATC 105695 || || ||| | | ||||||||| ||| Sbjct 6622685 GGGCTGTGGAACGAAGATATGAAGAATC 6622712 >seq4 Length=14220794 Score = 102 bits (112), Expect = 1e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 94801 GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC 94860 || ||||||||| | ||||| || || ||||| |||||||||||||| |||||| Sbjct 7897679 GCGGAGCGACTCGTGGCATTCGCAGCGGTGGAGGGCATCTTCTTCTCTGGCTCCTTCGCT 7897620 Query 94861 GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTT 94920 | || |||||||||||||| || || || ||||| ||||| || |||||||||||| Sbjct 7897619 TCCATCTATTGGCTCAAGAAACGGGGACTGATGCCCGGTCTTACCTACTCCAACGAGCTG 7897560 Query 94921 ATCTCTCGTGACGAGG 94936 ||| | ||||||| Sbjct 7897559 ATCAGCAGGGACGAGG 7897544 >seq390 Length=2268 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 94887 || ||||| ||||||||||||||||||||| || || | ||||| |||||| |||| Sbjct 1936 GTGGAGGGAATCTTCTTCTCTGGTTCCTTCGCTGCCATCTTCTGGCTGAAGAAGAGAGGC 1995 Query 94888 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 94923 || ||||| || || ||||||||||||||| ||| Sbjct 1996 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATC 2031 >seq73 Length=1910340 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 94887 || ||||| ||||||||||||||||||||| || || | ||||| |||||| |||| Sbjct 1745358 GTGGAGGGAATCTTCTTCTCTGGTTCCTTCGCTGCCATCTTCTGGCTGAAGAAGAGAGGC 1745299 Query 94888 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 94923 || ||||| || || ||||||||||||||| ||| Sbjct 1745298 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATC 1745263 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 94887 || ||||| ||||||||||||||||||||| || || | ||||| |||||| |||| Sbjct 1749250 GTGGAGGGAATCTTCTTCTCTGGTTCCTTCGCTGCCATCTTCTGGCTGAAGAAGAGAGGC 1749191 Query 94888 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 94923 || ||||| || || ||||||||||||||| ||| Sbjct 1749190 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATC 1749155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583220321700480