Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq31 242 5e-59 >seq31 Length=8019404 Score = 242 bits (268), Expect = 5e-59 Identities = 494/720 (69%), Gaps = 18/720 (3%) Strand=Plus/Plus Query 13692 GAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTC 13751 || || |||||||| ||||| || |||||||| | ||||||||||||| ||||| ||| Sbjct 4771376 GACTTCCCCATCGCTTACTCCATGGTGATCCATGAGCAGATCGAGATGTTTGAGCGACTC 4771435 Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTCCGGC 13811 ||| | |||| ||||| || ||||| |||||||||| ||| |||| |||||| Sbjct 4771436 CTGCGCTCCATTTACGCGCCCCAGAATATCTACTGCGTGCACCTGGATAAAAAGTCCAAT 4771495 Query 13812 GACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTGGCC 13871 || ||||||| || || ||| |||| | ||||| ||||||||| | | | | Sbjct 4771496 GAAGAGTTCAAGGCGGCTGTGGAGGCGATCGTCTCCTGCTTTCCTAACGTGTTCATAG-C 4771554 Query 13872 CACCGGCT--GCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCT 13929 |||| | | | | | |||||||||| ||| ||| || |||||||| || | | || Sbjct 4771555 CACCAGATTAGAAAG-TGTGGTGTACGCCTCGTGGTCCCGGGTGCAGGCAGATTTGAACT 4771613 Query 13930 GCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCGGGA 13989 | ||| || ||| ||| | | |||||||||||| |||| ||| ||||||| Sbjct 4771614 GTATGAAAGATCTGCTGAACTCGCAGATTAAGTGGAGGTACTTGCTAAACACCTGCGGGA 4771673 Query 13990 TGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCCCTGGGCGGCA 14049 |||||||| ||||||||||| ||||| || | ||||||||||||||| | ||| Sbjct 4771674 CCGACTTCCCCATCAAGACCAACAGAGAGATGGTCCAGGCGCTGAAGGCCCTCAGGGGCC 4771733 Query 14050 AGAACGCCCTGGAGAGCGAGGGCATGCCCAACCAC---AAGCTGCACCGC-ATCAGGAAG 14105 ||||| | |||||| |||| || ||||| || ||| ||| ||| ||| | Sbjct 4771734 AGAACAGCATGGAGACCGAG---ATCACCAACGACTATAAGAAGCAGCGCTGGCAGTATC 4771790 Query 14106 AGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCAACACCGGCAGGAACAAGGCCCCGCCG 14165 | ||| || ||| | || ||| || | | || || |||| ||| ||||||| Sbjct 4771791 A-TCACAACGTCACCAACACCGTCGT-CAGGACGA-ACGTGC-GGAA-AAG--CCCGCCG 4771843 Query 14166 CCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGCGGTCACCCGGGAGTTCGTG 14225 || | || | |||||| || ||||||| || || || || ||||| ||| || ||| Sbjct 4771844 CCTATAAGCACCCCCATGTTCTCGGGAAATGCCTATTTCGCTGTCACGAGGGCCTTTGTG 4771903 Query 14226 GACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTCATGCACTGGTTCGAGGACACGTAC 14285 | || || ||||| | | ||| ||| || | ||| ||||||||||| Sbjct 4771904 GGTCATGTGCTGAAGGATGCGGAGGTTCGGAAGCTTCTGGAGTGGGAGAAGGACACGTAC 4771963 Query 14286 AGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTACGGGACGCCCGGGGGGATC 14345 ||||| || |||||||||||||| || ||||||| ||| | ||||||| | Sbjct 4771964 AGCCCGGATGAGCACCTGTGGGCGACTCTGCAGAGGATGCCCTCCGTGCCCGGGTCCCTG 4772023 Query 14346 CCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGCCAAGGTCAGGTTCGTCAAGTGG 14405 ||| || | ||||||||||| || |||||| |||| ||| || || |||||| Sbjct 4772024 CCCACCAACATTAAGTACGACACGTCCGACATGCAGGCCGTGGTGCGGGCTGTGAAGTGG 4772083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658693483499520