Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq699 167 2e-36 seq10 89.7 4e-13 >seq699 Length=1473 Score = 167 bits (184), Expect = 2e-36 Identities = 134/162 (83%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001 || || |||| ||| || |||||||| |||||||| | ||||||||||| || || ||| Sbjct 314 AGACCTGTGATGTGTGCGATCATGTAGGTGAGGAGTGCATAGCTGGCGATATTGAAAGGT 373 Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061 || ||||| ||||| || ||||||| |||||| |||||||| || ||||| ||||| ||| Sbjct 374 ACTCCGAGGCCCATATCGCCCGACCGCTGGTACAGCTGACATGACAGCTCGCCGTCACTC 433 Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATG 30103 ||||| |||||||||| |||||| || || || ||||||||| Sbjct 434 ACGTAGAACTGACACAGGGCGTGACAGGGCGGCAGAGCCATG 475 Score = 118 bits (130), Expect = 9e-22 Identities = 127/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282 ||||| | ||| || || ||||| |||||||||||||| || ||||| ||||||||||| Sbjct 1279 CATGTTTGCGTAGTCGGCACCGAAGTGCCTCCACTGGAAACCATACACAGGTCCCAGGTC 1338 Query 30283 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30342 || || || |||| | |||||| ||||||| || || | || || || || || Sbjct 1339 CCCTTCCTCTCTGTCTTTGAAGCCAAGGTTGTCCAGGAACTCCCGTGACCCATTTGCTTC 1398 Query 30343 CCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390 ||| ||||| ||||| ||||| | |||||| |||| ||||| || || Sbjct 1399 CCAAATCTTCACCCCTTTCTCTGTGAGCTCCTTGGCATTTGTTGATCC 1446 >seq10 Length=24626513 Score = 89.7 bits (98), Expect = 4e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 110560 AGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCTGGACACGCG 110619 ||||| |||| ||||| |||| |||||| || ||||||| |||| ||| |||||| || Sbjct 78920 AGTCTGACAGGGTGCCAAGGCAAATCTCCATTCCTCCCGATTCCCAGGTCGGGACACACG 78979 Query 110620 GCCACGATACCGTTCAGAATGAGGGGCATGGT 110651 ||||||||||| ||||||| ||||||| || Sbjct 78980 GCCACGATACCATTCAGAACCTGGGGCATTGT 79011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406282907006784