Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq699 143 2e-29 seq10 86.0 5e-12 >seq699 Length=1473 Score = 143 bits (158), Expect = 2e-29 Identities = 129/162 (80%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || || |||| ||| || |||||||| |||||||| | ||||||||||| || || || Sbjct 314 AGACCTGTGATGTGTGCGATCATGTAGGTGAGGAGTGCATAGCTGGCGATATTGAAAGGT 373 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || ||||| ||||| || || |||| |||||| ||||| || || ||||| ||||| ||| Sbjct 374 ACTCCGAGGCCCATATCGCCCGACCGCTGGTACAGCTGACATGACAGCTCGCCGTCACTC 433 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATG 29875 ||||| |||||||||| ||| || || || || || |||||| Sbjct 434 ACGTAGAACTGACACAGGGCGTGACAGGGCGGCAGAGCCATG 475 Score = 109 bits (120), Expect = 4e-19 Identities = 113/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 |||| |||||||||||||| || ||||| ||||||||||| || || || |||| | || Sbjct 1299 CGAAGTGCCTCCACTGGAAACCATACACAGGTCCCAGGTCCCCTTCCTCTCTGTCTTTGA 1358 Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 30134 |||| ||||||| || || | || || || || ||||| ||||| ||||| |||| Sbjct 1359 AGCCAAGGTTGTCCAGGAACTCCCGTGACCCATTTGCTTCCCAAATCTTCACCCCTTTCT 1418 Query 30135 CGGAGAGCTCTTTGGAGTTTGTGGACCC 30162 | | |||||| |||| ||||| || || Sbjct 1419 CTGTGAGCTCCTTGGCATTTGTTGATCC 1446 >seq10 Length=24626513 Score = 86.0 bits (94), Expect = 5e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 114443 AGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCTGGACACGCT 114502 ||||| || || ||||| |||| |||||| || ||||||| |||| ||| |||||| | Sbjct 78920 AGTCTGACAGGGTGCCAAGGCAAATCTCCATTCCTCCCGATTCCCAGGTCGGGACACACG 78979 Query 114503 GCCACGATACCGTTCAGAATGAGGGGCATGGT 114534 ||||||||||| ||||||| ||||||| || Sbjct 78980 GCCACGATACCATTCAGAACCTGGGGCATTGT 79011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406135716967072