Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq699 152 4e-32 seq65 147 2e-30 >seq699 Length=1473 Score = 152 bits (168), Expect = 4e-32 Identities = 131/162 (81%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || |||| ||| || |||||||| |||||||| | ||||||||||| || || ||| Sbjct 314 AGACCTGTGATGTGTGCGATCATGTAGGTGAGGAGTGCATAGCTGGCGATATTGAAAGGT 373 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || ||||| ||||| || ||||||| |||||| |||||||| || ||||| || || || Sbjct 374 ACTCCGAGGCCCATATCGCCCGACCGCTGGTACAGCTGACATGACAGCTCGCCGTCACTC 433 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATG 27369 ||||| |||||||| | |||||| || || || ||||||||| Sbjct 434 ACGTAGAACTGACACAGGGCGTGACAGGGCGGCAGAGCCATG 475 Score = 114 bits (126), Expect = 1e-20 Identities = 126/168 (75%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||||| | ||| || || ||||| |||||||| ||||| || ||||| ||||||||||| Sbjct 1279 CATGTTTGCGTAGTCGGCACCGAAGTGCCTCCACTGGAAACCATACACAGGTCCCAGGTC 1338 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 || || || |||| | |||||| ||||||| || || | || || || || || Sbjct 1339 CCCTTCCTCTCTGTCTTTGAAGCCAAGGTTGTCCAGGAACTCCCGTGACCCATTTGCTTC 1398 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 ||| ||||| ||||| ||||| | |||||| |||| ||||| || || Sbjct 1399 CCAAATCTTCACCCCTTTCTCTGTGAGCTCCTTGGCATTTGTTGATCC 1446 >seq65 Length=3087625 Score = 147 bits (162), Expect = 2e-30 Identities = 181/245 (74%), Gaps = 2/245 (1%) Strand=Plus/Plus Query 69074 GGTGAACGGATGGGGAAAGTTTTATATCCCCACCGCCGTGACGATGCAGGTCATCGGTTA 69133 ||| || || ||||| ||||| || ||| | | || | ||| |||| | ||| Sbjct 604352 GGTAAATGGGTGGGGGAAGTTCTACCTCCGCGACAGTGTAAACATGAAGGTTGTAGGTGT 604411 Query 69134 TGTG-ACGGGAACTCCATACCAATGTGACCAGCTTGTCCTGATGACCTGCGAGGACCAGA 69192 | | |||||| | |||||| ||| ||||||||||| ||||||||||| |||||||||| Sbjct 604412 AGCGCACGGGA-CAGCATACCCATGCGACCAGCTTGTTCTGATGACCTGTGAGGACCAGA 604470 Query 69193 AGGTGTACGGCTATGACGGAGACGAGCTGCATGTGGTGGCTAACTGTCTGGATCAGATGG 69252 || |||||| ||| || ||||| |||||||| | |||||| | ||||| || | Sbjct 604471 AGCTGTACGCCTACGATGGAGAGGAGCTGCACGAGGTGGCATCGAGCCTGGAGGAGCTTT 604530 Query 69253 GGGAAGAAGGAATAGCCTATCCTGCATTCCAGAGCTATTATCATGGGGAGGCCTTCAAAC 69312 | ||||||||| ||||| |||| | |||||| ||||| ||||||||||||||| Sbjct 604531 GTATGGAAGGAATAAGTTATCCAGCATCCAGGAGCTACTATCACGGGGAGGCCTTCAAAA 604590 Query 69313 ATATG 69317 ||||| Sbjct 604591 ATATG 604595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369482197295312