Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq5 172 8e-38 seq6 104 3e-17 >seq5 Length=21819443 Score = 172 bits (190), Expect = 8e-38 Identities = 179/235 (76%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 8351 TTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAG 8410 |||||||| |||| || || | |||||||| ||||| |||||||||||| |||| ||| Sbjct 3821290 TTGACGATATCGAAGCCGACTTTGCCGCCGAACGTGCTTGGCTTCCAGTACTCCGGAGAG 3821231 Query 8411 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTC 8470 |||||| ||| |||| | ||| ||||||||||| || || |||| ||| | ||| || Sbjct 3821230 CAGATGGGGTTTCCCATTAAGCCCTTGAGGGAGAAAGGGGCACCCATCTCCACCATGGTC 3821171 Query 8471 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACA 8530 || || |||||||||| || | ||| || || |||| | || | ||||||||||||| Sbjct 3821170 TCCCCAAAGATGGCGTCAGGCCTGGGTTTCTCAACCATCAGACCTGGGTACAGCTCCACA 3821111 Query 8531 GCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTG 8585 || || | || |||||| | || ||| || ||||| ||||| || ||||||| Sbjct 3821110 GCGTCAATGTGTCCGTACATCTCCTCGAGCTCTGCAGCCATCTCTTTGTCTCCTG 3821056 Score = 145 bits (160), Expect = 1e-29 Identities = 175/236 (74%), Gaps = 8/236 (3%) Strand=Plus/Minus Query 9235 CCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCT 9294 ||||| | ||||| || ||||||||||| ||| |||||| ||| || || || | Sbjct 3819464 CCGATCAGAATGAGCCGTGTGGTCTGGAAGAGTCTTTCGTCATCCCAGTCAGGGTGGACC 3819405 Query 9295 TGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATG 9354 | |||||||||||| || ||||||||||| |||| |||||||| |||||||||||||| Sbjct 3819404 TCTTTCAGAACATCACATACCCTGTTGTGCTCCCGTAGCCAGATGGTGGCGTACATCATC 3819345 Query 9355 AGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTT----TTCGGG 9410 || || || ||||||||||| ||||| || || ||||| || || ||| |||||| Sbjct 3819344 AGGCCGGGAACCAGGCCAAAGGCCTCGTGGCCAACAGC--GAAGC--GTTCAGATTCGGG 3819289 Query 9411 CACTTCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACA 9466 | | ||||| ||| ||| | || ||| |||||| ||| || || |||| Sbjct 3819288 AATGTGAGGAGGGTAGTGCATATTAACACCGACTTCTTTGGCCGTTGGTGGGTACA 3819233 >seq6 Length=17716291 Score = 104 bits (114), Expect = 3e-17 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 8282 GGAACTCGGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATA 8341 |||| || ||| || | ||||||| ||| || || ||||||| ||| || || Sbjct 5280038 GGAATTCTGAAGGCCACGTACGGACATGTCTTCACATTATTACAGAC--GAGGCTCTTTA 5279981 Query 8342 GTTGCGCTC--TTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGT 8399 || ||| || || || | || ||||| | || || ||||||||||||||||||| Sbjct 5279980 GTGTGGCTGAGTTCACTATATCAAAGCCCACTTTGCCCCCAAAGGTGCTGGGCTTCCAGT 5279921 Query 8400 ACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACT 8459 | |||| || || ||| ||| ||| ||||||||| ||||||||||| || |||| || Sbjct 5279920 ATTCCGGAGAACATATGGGGTTTCCCAGGAGGCCTTTAAGGGAGAACGGGGCACCCATCT 5279861 Query 8460 CGAGAATGCTCTCACCGAAGATGGC 8484 | | |||||||| || || || || Sbjct 5279860 CCACCATGCTCTCTCCAAATATAGC 5279836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716827048750080