Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1512 87.8 2e-12 seq334 87.8 2e-12 >seq1512 Length=3299 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/115 (77%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 16219 TAGTC-CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTC 16277 ||||| | |||||||||||||| || |||||||| || || | || ||||| |||| Sbjct 206 TAGTCACCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTC 265 Query 16278 GTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAAC 16332 ||||| | |||||| |||||||| || ||||| || ||||| || ||||| || Sbjct 266 TCTTCTTCAGCCAGAAGATCGCAGCGAAGGACCCAGAGAAGAAGATTCCCTCCAC 320 >seq334 Length=631087 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/115 (77%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 16219 TAGTC-CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTC 16277 ||||| | |||||||||||||| || |||||||| || || | || ||||| |||| Sbjct 411799 TAGTCACCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTC 411858 Query 16278 GTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAAC 16332 ||||| | |||||| |||||||| || ||||| || ||||| || ||||| || Sbjct 411859 TCTTCTTCAGCCAGAAGATCGCAGCGAAGGACCCAGAGAAGAAGATTCCCTCCAC 411913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511282570153040