Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq47 159 4e-34 seq346 134 1e-26 seq1512 120 3e-22 seq334 120 3e-22 seq12338 100 3e-16 >seq47 Length=2045465 Score = 159 bits (176), Expect = 4e-34 Identities = 176/232 (76%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || || || ||||| ||||| ||||| ||||||||| | || ||||| || Sbjct 352762 AACATGCAGATCTTTGTGAAAACCCTCACTGGCAAGACCATCACCCTGGAGGTCGAGCCC 352703 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | ||||| | | | |||| |||||| || || | ||||| || ||||| ||| | || Sbjct 352702 AGCGACACCATTGAGAACG-TCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGA 352644 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| | || |||| || ||||| || ||||| || | ||||||||| |||||| Sbjct 352643 CCAGCAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGCCGCACCCTCTCCGACTA 352584 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| ||| |||| || ||||| || |||| ||||||| ||| Sbjct 352583 CAACATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGGGGTGGC 352532 Score = 158 bits (174), Expect = 1e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| ||||||||| | || ||||| | | | Sbjct 352531 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTCGAGCCTAGC 352472 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| || ||||| ||| | ||||| Sbjct 352471 GACACCATTGAGAACG-TCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCA 352413 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || ||||| |||||||| || | ||||||||| ||||||||| Sbjct 352412 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAA 352353 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||| ||| |||| || ||||| || |||| ||||||| ||| Sbjct 352352 CATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGGGGTGGC 352304 Score = 154 bits (170), Expect = 2e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| ||||||||| | || ||||| | | | Sbjct 352303 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTCGAGCCTAGC 352244 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| || ||||| ||| | ||||| Sbjct 352243 GACACCATTGAGAACG-TCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCA 352185 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || ||||| |||||||| || | ||||||||| ||| ||||| Sbjct 352184 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGATTACAA 352125 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||| ||| |||| || ||||| || |||| ||||||| ||| Sbjct 352124 CATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGGGGTGGC 352076 Score = 152 bits (168), Expect = 5e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| ||||||||| | || || || ||| | Sbjct 352075 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCCAGC 352016 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || || | ||||| || ||||| ||| | |||||| Sbjct 352015 GACACCATTGAGAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAG 351956 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || ||||| |||||||| || | ||||||||| |||||||||| Sbjct 351955 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 351896 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||| ||| |||| || ||||| || |||| ||||||| || Sbjct 351895 ATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGGGGTGG 351849 >seq346 Length=431050 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || || || ||||||||| | || || || | | | Sbjct 243218 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCAAGC 243277 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| ||| || | || || || |||||||| | |||||| Sbjct 243278 GACACCATTGAGAATGTTAAGGCAAAGATCCAGGATAAGGAAGGCATCCCTCCTGACCAG 243337 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| || || ||||||||||| || | || |||||| ||||||||| Sbjct 243338 CAGCGTCTCATCTTTGCTGGAAAACAGCTGGAAGATGGCCGTACCCTCTCTGACTACAAC 243397 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| |||| || || || || ||||| |||| || || Sbjct 243398 ATCCAGAAGGAGTCCACCCTCCACCTGGTCTTGCGTCTGAGAGGAGG 243444 Score = 134 bits (148), Expect = 1e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || || || | | | Sbjct 243446 ATGCAGATCTTTGTCAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCAAGC 243505 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| ||||| | || || || |||||||| | ||||| Sbjct 243506 GACACCATCGAGAACG-TCAAGGCCAAAATCCAGGATAAGGAAGGCATCCCTCCTGACCA 243564 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| || || ||||||||||| || | || |||||| |||||||| Sbjct 243565 GCAGCGTCTCATCTTTGCTGGAAAACAGCTGGAAGATGGCCGTACCCTCTCTGACTACAA 243624 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||| |||||| |||| || ||||| ||| Sbjct 243625 CATCCAAAAGGAGTCCACCCTCCATCTTGTG 243655 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || || || ||||||||| | || || || | | | Sbjct 242990 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCAAGC 243049 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| ||| || | || || || |||||||| | |||||| Sbjct 243050 GACACCATTGAGAATGTTAAGGCAAAGATCCAGGATAAGGAAGGCATCCCTCCTGACCAG 243109 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || || || |||||||| || | || |||||| ||||||||| Sbjct 243110 CAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGTACCCTCTCTGACTACAAC 243169 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| |||| || ||||| ||| | || |||| || || Sbjct 243170 ATCCAGAAGGAGTCCACCCTCCATCTTGTGCTCCGTCTGAGAGGAGG 243216 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || || || || || || || || || |||||||| | || || || || Sbjct 242759 AAGATGCAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACTTTGGAGGTGGAGCCC 242818 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | ||||| | | | | | |||| ||| || | || || || |||||||| | ||| Sbjct 242819 AGCGACACCATTGAGAATGTTAAGGCAAAGATCCAGGATAAGGAAGGCATCCCTCCTGAC 242878 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | || |||| || || || |||||||| || | || ||||| ||||||| Sbjct 242879 CAGCAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGTACCCTTTCCGACTAC 242938 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||||| |||| || ||||| ||| | || |||| || || Sbjct 242939 AACATCCAGAAGGAGTCCACCCTCCATCTTGTGCTCCGTCTGAGAGGAGG 242988 >seq1512 Length=3299 Score = 120 bits (132), Expect = 3e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 117032 GGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCC 117091 || ||||| ||||||| ||||||||||| ||||| ||||||| || || ||||| Sbjct 347 GGGGAGCGTGTGGTGGCGTTCGCGGCCGTGGAGGGAATCTTCTTCTCTGGGTCCTTCGCT 288 Query 117092 GCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTC 117151 || || || ||||| ||||| | ||||| |||||||||||||| ||| |||||||||| Sbjct 287 GCGATCTTCTGGCTGAAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTC 228 Query 117152 ATCTCCAGGGACGAGG 117167 ||| ||| ||||||| Sbjct 227 ATCAGCAGAGACGAGG 212 >seq334 Length=631087 Score = 120 bits (132), Expect = 3e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 117032 GGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCC 117091 || ||||| ||||||| ||||||||||| ||||| ||||||| || || ||||| Sbjct 411940 GGAGAGCGTGTGGTGGCGTTCGCGGCCGTGGAGGGAATCTTCTTCTCTGGGTCCTTCGCT 411881 Query 117092 GCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTC 117151 || || || ||||| ||||| | ||||| |||||||||||||| ||| |||||||||| Sbjct 411880 GCGATCTTCTGGCTGAAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTC 411821 Query 117152 ATCTCCAGGGACGAGG 117167 ||| ||| ||||||| Sbjct 411820 ATCAGCAGAGACGAGG 411805 Score = 100 bits (110), Expect = 3e-16 Identities = 97/122 (80%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 116685 AGGTGGACCTGTCCAAGGACACG-AGCGACTGGGAGCGCTTGAACGACAACGAGCGCCAT 116743 ||||||||||||||| |||| | ||| |||||||| | | ||| | |||||| | Sbjct 412551 AGGTGGACCTGTCCATGGACCAGCAGC-ACTGGGAGTCTCTAAGGGACGAGGAGCGCTAC 412493 Query 116744 TTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTG 116803 |||||| |||||| |||| || || |||||||||||||| |||||||||||||| ||| Sbjct 412492 TTCATCTCTCACGTGTTGGCGTTCTTTGCCGCCAGCGACGGGATCGTCAACGAGAACCTG 412433 Query 116804 GT 116805 || Sbjct 412432 GT 412431 Score = 100 bits (110), Expect = 3e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||||| || ||||| | || || || || |||||||| || |||| ||| Sbjct 412741 GAGCCGCTGCTGAAGGACAACCCTCATCGCTTTGTCATCTTCCCCATCCAGTACCACGAC 412682 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT 116688 || |||| |||||||| || ||||||||||| |||||||||| |||||||| Sbjct 412681 ATCTGGCAGATGTACAAGAAAGCCGAGGCGTCTTTCTGGACCGCAGAGGAGGT 412629 Score = 95.1 bits (104), Expect = 1e-14 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 116803 GGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCA 116862 ||| ||||| ||| | ||||| ||||||||| | ||||| |||| ||||| || || || Sbjct 412332 GGTGGAGCGCTTCACACAGGAAGTGCAGGTGACGGAGGCCAGGTGTTTCTATGGTTTCCA 412273 Query 116863 GATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 |||||||||||||||| | ||||| || ||||| ||||||| |||| ||| Sbjct 412272 GATCGCCATGGAGAACATCCACTCTGAGATGTACAGCCTCCTCATCAACACCTAC 412218 >seq12338 Length=343 Score = 100 bits (110), Expect = 3e-16 Identities = 97/122 (80%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 116685 AGGTGGACCTGTCCAAGGACACG-AGCGACTGGGAGCGCTTGAACGACAACGAGCGCCAT 116743 ||||||||||||||| |||| | ||| |||||||| | | ||| | |||||| | Sbjct 332 AGGTGGACCTGTCCATGGACCAGCAGC-ACTGGGAGTCTCTAAGGGACGAGGAGCGCTAC 274 Query 116744 TTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTG 116803 |||||| |||||| |||| || || |||||||||||||| |||||||||||||| ||| Sbjct 273 TTCATCTCTCACGTGTTGGCGTTCTTTGCCGCCAGCGACGGGATCGTCAACGAGAACCTG 214 Query 116804 GT 116805 || Sbjct 213 GT 212 Score = 93.3 bits (102), Expect = 4e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 116803 GGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCA 116862 ||| ||||| ||| | ||||| ||||||||| | ||||| |||| ||||| || || || Sbjct 113 GGTGGAGCGCTTCACACAGGAAGTGCAGGTGACGGAGGCCAGGTGTTTCTATGGTTTCCA 54 Query 116863 GATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACAC 116913 |||||||||||||||| | ||||| || ||||| ||||||| |||| Sbjct 53 GATCGCCATGGAGAACATCCACTCTGAGATGTACAGCCTCCTCATCAACAC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515086389370720