Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq346 123 2e-23 seq47 98.7 9e-16 >seq346 Length=431050 Score = 123 bits (136), Expect = 2e-23 Identities = 153/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| |||| || ||||| ||||| |||||||| || | || || ||| || | Sbjct 243653 CAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGGGTACGGCCATCTTCCA 243594 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 ||||||||||||| |||||||||||||||| || ||||| ||||| ||||| || | Sbjct 243593 GCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGA 243534 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 |||| || || | |||| |||||| | ||| ||||| | ||| | || |||| Sbjct 243533 TTTTGGCCTTGACGTTCTCGATGGTGTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTGC 243474 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||| || || ||||| |||||||| Sbjct 243473 CGGTCAGGGTCTTGACAAAGATCTGCAT 243446 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| | | | ||| |||| ||||| || ||||| || || |||||||| || Sbjct 243446 TACCTCCTCTCAGACGCAAGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 243387 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | || || ||| || |||||||||||||| |||||||||||||||| || |||| Sbjct 243386 AGAGGGTACGGCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAG 243327 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||| ||||| || || ||| ||||| | || | |||||| | ||| | Sbjct 243326 GGATGCCTTCCTTATCCTGGATCTTTGCCTTAACATTCTCAATGGTGTCGCTTGGCTCCA 243267 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | || || |||||||| || || ||||| || ||||| Sbjct 243266 CCTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 243218 >seq47 Length=2045465 Score = 98.7 bits (108), Expect = 9e-16 Identities = 148/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| |||| || |||||||| || |||||||||||| | ||||| ||| || | Sbjct 352096 CAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCTTCCA 352155 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 |||| || ||||| |||| || | |||||| || || || ||||| |||||||| | Sbjct 352156 GCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGA 352215 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || || || | || | |||||| | ||||||||| | ||| | || |||| Sbjct 352216 TCTTAGCCTTGACGTTCTCAATGGTGTCGCTAGGCTCGACCTCCAGGGTGATGGTCTTGC 352275 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCATG 118739 | || || || || || || ||||||||| Sbjct 352276 CAGTGAGGGTCTTAACGAAGATCTGCATG 352304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433721365134424