Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17]
20,622 sequences; 684,144,148 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq346 125 6e-24
seq47 107 2e-18
>seq346
Length=431050
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|| ||||||| | || |||| ||| || ||| ||||||||| |||||||||||
Sbjct 243444 CCTCCTCTCAGACGCAAGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 243385
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| || | || ||||| |||||||| || || || | ||||| ||||| |||||
Sbjct 243384 AGGGTACGGCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGG 243325
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| || ||||| ||| || ||| |||||| | | | | |||| | |||||||
Sbjct 243324 ATGCCTTCCTTATCCTGGATCTTTGCCTTAACATTCTCAATGGTGTCGCTTGGCTCCACC 243265
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||| ||| || ||||| || ||||| ||||| ||||||||||||||
Sbjct 243264 TCCAGGGTGATGGTCTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 243218
Score = 118 bits (130), Expect = 8e-22
Identities = 154/212 (73%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| ||||||||| |||||||||||| || || | || ||||
Sbjct 242969 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTACGGCCATCTTCCA 242910
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| || ||||| || || |||| || ||| ||||| ||||| | || ||||| ||| |
Sbjct 242909 GCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGA 242850
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| ||| |||||| | | | | |||| | ||||||||||| || || ||||| |
Sbjct 242849 TCTTTGCCTTAACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAAAGTGATGGTCTTAC 242790
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
| ||||| |||||||||||||| ||||| |||
Sbjct 242789 CAGTCAGGGTCTTCACAAAGATCTGCATCTTG 242758
Score = 114 bits (126), Expect = 1e-20
Identities = 151/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| ||||||||| ||||||||||| || || | || ||||
Sbjct 243197 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCATCTTCCA 243138
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| || ||||| || || |||| || ||| ||||| ||||| | || ||||| ||| |
Sbjct 243137 GCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGA 243078
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| ||| |||||| | | | | |||| | ||||||||||| ||| || ||||| |
Sbjct 243077 TCTTTGCCTTAACATTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTAC 243018
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| ||||| ||||| ||||||||||||||
Sbjct 243017 CGGTCAGGGTCTTGACAAAGATTTGCAT 242990
Score = 105 bits (116), Expect = 5e-18
Identities = 149/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| |||||| || ||||||||||| || || | || ||||
Sbjct 243653 CAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGGGTACGGCCATCTTCCA 243594
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| |||||||| || || || | ||||| ||||| ||||| | || ||||| ||| |
Sbjct 243593 GCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGA 243534
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
|||| ||| || | | | | |||| | ||||||||||| ||| || |||||||
Sbjct 243533 TTTTGGCCTTGACGTTCTCGATGGTGTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTGC 243474
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| ||||| ||||| |||||||| |||||
Sbjct 243473 CGGTCAGGGTCTTGACAAAGATCTGCAT 243446
>seq47
Length=2045465
Score = 107 bits (118), Expect = 2e-18
Identities = 151/211 (72%), Gaps = 1/211 (0%)
Strand=Plus/Plus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| ||| ||||| |||||||||||| || ||| | || ||||
Sbjct 352552 CAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCA 352611
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
|||| || || || || |||| || ||| ||||| || || | || ||||||||| |
Sbjct 352612 GTTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGA 352671
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || ||| || | | | | |||| | ||| ||||||| ||| || |||||||
Sbjct 352672 TCTTAGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTCTTGC 352731
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339
| || || || ||||||||||| ||||||||
Sbjct 352732 CAGTGAGGGTTTTCACAAAGATCTGCATGTT 352762
Score = 98.7 bits (108), Expect = 8e-16
Identities = 148/209 (71%), Gaps = 1/209 (0%)
Strand=Plus/Plus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| ||| ||||| |||||||||||| || ||| | || ||||
Sbjct 352324 CAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCA 352383
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| || || || || || |||| || ||| ||||| || || | || ||||||||| |
Sbjct 352384 GCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGA 352443
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || ||| || | | | | |||| | | ||| ||||||| ||| || |||||||
Sbjct 352444 TCTTAGCCTTGACGTTCTCAATGGTGTCGCTAGGCTCGACCTCCAGGGTGATGGTCTTGC 352503
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATG 45337
| || || ||||| || ||||| ||||||
Sbjct 352504 CAGTGAGGGTCTTAACGAAGATCTGCATG 352532
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/209 (70%), Gaps = 1/209 (0%)
Strand=Plus/Plus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| ||| ||||| |||||||||||| || ||| | || ||||
Sbjct 351868 CAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCA 351927
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| || || || || || |||| || ||| ||||| || || | || ||||||||| |
Sbjct 351928 GCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGA 351987
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || ||| || | | | | |||| | ||| ||||||| ||| || |||||||
Sbjct 351988 TCTTAGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTGC 352047
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATG 45337
| || || ||||| || ||||| ||||||
Sbjct 352048 CAGTGAGGGTCTTAACGAAGATCTGCATG 352076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 394975905503062
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |