Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq328 365 4e-96 seq47 105 6e-18 seq346 100 3e-16 >seq328 Length=840127 Score = 365 bits (404), Expect = 4e-96 Identities = 1032/1572 (66%), Gaps = 37/1572 (2%) Strand=Plus/Minus Query 22430 GTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGT 22489 |||| ||||||| ||||||| | || || | || ||||| ||||||||||| | || Sbjct 221609 GTCAGGTCTTTGAGCAGATGAGGATTAACGATCTGGAACTCTCCGGACAAGACCCTACGA 221550 Query 22490 TGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTC 22549 || |||||| ||| | | ||| | ||| || ||||| ||||| ||||| ||||| Sbjct 221549 GTATAGATGTTGCTGGTGTAGGCTTCAATAGACTCGTTGTTGCCCAGGATCTGGGCGGTG 221490 Query 22550 GAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTA 22609 || || || ||||| || |||| ||| || ||| |||| ||||||||| | || || Sbjct 221489 GAGGCCGTGGGCATTGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGATCTTC 221430 Query 22610 CTCTTGAGCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTAT 22669 ||| |||| |||||||||||| ||| |||||| || ||||||| ||||| Sbjct 221429 TCCTTCAGCAGTTCCCAGTCCCACAGGCCGGTGGGCGTC---TTCCCCCACATGTCGTAC 221373 Query 22670 TGCAACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATC-GC 22728 || | | ||| || | || ||||||||| || ||||| || ||| | || | Sbjct 221372 TGAAGGATGCCCTTGCTGACAGGAGAGCCTTCGTAAGTCTCGTAGGGGCCA-AGCTCACC 221314 Query 22729 GGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTT 22788 || || || ||||||||||||| || |||| || |||||||| ||||| | |||| Sbjct 221313 AGCCAGCTCACAGCTCGCCTCCAGGGCTGCGTAGTAGATAGTCTCAAAGATCTGGGTGTT 221254 Query 22789 CAATTCGGCGGCGGCGACG--CTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCC 22846 || | || | | | | ||||| | || |||||||| | ||| || || ||| Sbjct 221253 CA--GCAGCTGTGCCTCAGGACTTTCAAAGGGGTAACGCATCAGGATGAAGGCATCTGCC 221196 Query 22847 ATACCCTGAACGCCTATACCGATCGGTCGGT---TTTTCAGATTCGACACTTTTGCCTCG 22903 | |||||| || || || || || || | || ||| || ||| | || || Sbjct 221195 AAACCCTGGACTCCGATTCCTATTGGCCTGTGACGTTT---GTTGGACTTCTCGGCTTCA 221139 Query 22904 GGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTT 22963 || | ||||| | || ||||| | |||||||||||| || | || ||| || Sbjct 221138 GGTACTGGATAGTAGTTAATGTCGATGATCCTGTTCAAGTTTTTGACAATAACTTTGGTC 221079 Query 22964 ATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGAT--TGTACAACAAACTTGTTGACGG 23021 | | ||||||| | | | | | | |||| || |||||| | Sbjct 221078 ACATATGCCAGTTTTTTGAAGTCGT--ATGTCTGCTCAGGGGTAACATACATGTTGAGAG 221021 Query 23022 CGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGG 23081 |||| || || ||||| || || || ||||| |||||| ||||| || |||| ||| | Sbjct 221020 CGATGGAAGCCAGATTACAGACCGCTACCTCATCTTTGCCGGTGTATTCGACAACTTCTG 220961 Query 23082 TACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACG 23141 | || || ||||| || || || || |||| || ||||||||| || || ||||| | Sbjct 220960 TGCAGAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTGGTTGCTCTTCCGGTTGCAGG 220901 Query 23142 AATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCC 23201 || ||||| |||||||| || || || || || ||| |||||||| || || || Sbjct 220900 CGTCTTTGTACAGCATGTATGGTGTACCAGTTTCTGTCTGGGACTCGATAATGGCGTACC 220841 Query 23202 ACATAGTCTGAGCGTGAACACGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACA 23261 ||| |||||| | || ||| | ||| || || | || || || ||| | Sbjct 220840 ACAGCTGCTGAGCCTTCACCACTCGTTTGACCCTCCCCTCCTTTTCATATTTGGTGTAGA 220781 Query 23262 ACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGA 23321 | || || || | || | || || |||| || || | | |||||||||| | Sbjct 220780 GTTCCTCGAACTCCTCCCCCCAGCACTCATCCAGTCCAGGGCACTCGTTCGGACACATCA 220721 Query 23322 GACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGT 23381 | ||| | || | || || | |||| || | || || ||||| | || | Sbjct 220720 AAGACCAGTCTTGGTTGCTCTCCACTCTCTTCATGAACAAGTCTGGGATCCACAAGGCAT 220661 Query 23382 AGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGT 23441 | || || || | ||| | | |||||| || || |||||||| |||| |||| |||| Sbjct 220660 AAAAAAGATCTCTGGCCCTCTGCTCCTCCTTCCCTGTGTTCTTCTTCAGCTCCAGGAAGT 220601 Query 23442 CCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGC 23501 | ||||| || ||||| ||||| ||||| | ||| || ||||| |||||||| |||| Sbjct 220600 CAAACACATCAAAGTGCCAGGGCTCCAGGTACATGGCGAAAGCGCCGGGTCTCTTGTTGC 220541 Query 23502 CGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGT 23561 | ||||| ||||| ||||| |||||||||||||| ||||| ||||| || || || || | Sbjct 220540 CACCCTGGTCGACATAACGTGCCGTGTTGTTGTATACTCTCAGCATGGGGACCAGCCCAT 220481 Query 23562 TGGACGCGCCGCCTACGCCCGCCA---CACTCGAACCTTTTGCTC-GAACGTTGTGAACG 23617 | || ||| ||| || | ||| ||| | |||| || ||| || Sbjct 220480 TTGAATTGCCATTGGTGCCAGCGATGTAGCTC---CCTGTGGCTCTGATACAGCTGACCG 220424 Query 23618 TGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAG 23677 | |||||| ||||| ||||||| || || | || || || ||||| ||||| || Sbjct 220423 -CCACACCTATTCCTCCAGCCGATTTGGAGATGAGGGCACACTGCTTCAGTGTGTCATAT 220365 Query 23678 ATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTG-CGCTTT 23736 |||||||| |||||||| || || | || | || ||| || || | || ||| | Sbjct 220364 ATGCCCTCAATGCTGTCGTCCTTCATGGCAAGCAGGAAGCAGCTGGATAGCTGTGGCTGT 220305 Query 23737 GGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCA-TTC---GACA 23792 | || | || || ||||| || ||| || || || ||| ||| || | Sbjct 220304 TTG-GTTCCTGCATTAAAAAGTGTAGGAGAGGCATGGGTGAA----CCACTTCTCTGAGA 220250 Query 23793 TTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGC 23852 || ||||| || || ||||| || || || || |||||| || || || || | Sbjct 220249 GCAGGTTGTAGGTCTCAATGGCTGCGTCGATATCGGTTCCGTGGATTCCATCCGCCACTC 220190 Query 23853 GCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAAC 23912 ||| | ||||| || || | |||| || |||||| || || | ||| || || | Sbjct 220189 TCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTGCCGTTGATCTTCAGCAGGTAGGACC 220130 Query 23913 GTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCG 23972 | || || || |||||||| ||| ||| || || |||| | ||||||| Sbjct 220129 TCTCCAGGGTCTTGAATCCAAAGAAGTTGTAGGAGAAATCTTTGTCGTAAATGATGGCCG 220070 Query 23973 AATTCAAACGGT 23984 |||| | |||| Sbjct 220069 AATTGAGGCGGT 220058 >seq47 Length=2045465 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || |||||| | || ||||| || Sbjct 352076 CATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCCAG 352017 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | ||||| | || ||||||||||||| | || || ||||| Sbjct 352016 CGACACCATTGAGAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCA 351957 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || || |||||||| ||| ||||||| || | ||| || || Sbjct 351956 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAA 351897 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || ||||| || || || ||||| || || | |||||||| || Sbjct 351896 CATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGGGGTGG 351849 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || |||||| | || || || || Sbjct 352304 CATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTCGAGCCTAG 352245 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | ||||| | || ||||||||||||| | || || ||||| Sbjct 352244 CGACACCATTGAGAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCA 352185 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || || |||||||| ||| ||||||| || | |||||| || Sbjct 352184 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGATTACAA 352125 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || ||||| || || || ||||| || || | |||||||| || Sbjct 352124 CATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGGGGTGG 352077 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || |||||| | || || || || Sbjct 352532 CATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTCGAGCCTAG 352473 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | ||||| | || ||||||||||||| | || || ||||| Sbjct 352472 CGACACCATTGAGAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCA 352413 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || || |||||||| ||| ||||||| || | ||| || || Sbjct 352412 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAA 352353 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || ||||| || || || ||||| || || | |||||||| || Sbjct 352352 CATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGGGGTGG 352305 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 |||||||| || || || || || || || ||||| || |||||| | || || || || Sbjct 352762 AACATGCAGATCTTTGTGAAAACCCTCACTGGCAAGACCATCACCCTGGAGGTCGAGCCC 352703 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||| | || | ||||| | || ||||||||||||| | || || ||| Sbjct 352702 AGCGACACCATTGAGAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGAC 352643 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||| | || || || |||||||| || ||||||| || | ||| || Sbjct 352642 CAGCAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGCCGCACCCTCTCCGACTAC 352583 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || ||||| || || || ||||| || || | |||||||| || Sbjct 352582 AACATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGGGGTGG 352533 >seq346 Length=431050 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| ||||| ||||| || |||||| | || || || || | Sbjct 243446 ATGCAGATCTTTGTCAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCAAGC 243505 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | ||| ||| ||||||||| | || || |||||| Sbjct 243506 GACACCATCGAGAACGTCAAGGCCAAAATCCAGGATAAGGAAGGCATCCCTCCTGACCAG 243565 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||||| || || ||||| |||||| ||||||| Sbjct 243566 CAGCGTCTCATCTTTGCTGGAAAACAGCTGGAAGA 243600 Score = 89.7 bits (98), Expect = 5e-13 Identities = 115/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| ||||| || || || |||||| | || || || || | Sbjct 243218 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCAAGC 243277 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || || || ||| | ||| ||||||||| | || || ||||| Sbjct 243278 GACACCATTGAGAATGTTAAGGCAAAGA-TCCAGGATAAGGAAGGCATCCCTCCTGACCA 243336 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||||||| || || ||||| |||||| ||||||| Sbjct 243337 GCAGCGTCTCATCTTTGCTGGAAAACAGCTGGAAGA 243372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445651492566240