Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq328 572 2e-158 seq34 93.3 5e-14 seq1512 87.8 2e-12 seq334 87.8 2e-12 >seq328 Length=840127 Score = 572 bits (634), Expect = 2e-158 Identities = 1299/1945 (67%), Gaps = 23/1945 (1%) Strand=Plus/Minus Query 62325 TTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTA 62384 ||||| ||||| ||| |||| | ||||| || | || | || ||||| || ||| Sbjct 221642 TTCTTCATCTCCTCACTCCACAGGCCCCTCTCCGTCAGGTCTTTGAGCAGATGAGGATTA 221583 Query 62385 ACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCC 62444 || | ||||| ||||| ||||| || || ||||| || || || ||||| || | ||| Sbjct 221582 ACGATCTGGAACTCTCCGGACAAGACCCTACGAGTATAGATGTTGCTGGTGTAGGCTTCA 221523 Query 62445 ACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAAT 62504 | ||||| || || |||| || || || || || || || ||||| || |||| || Sbjct 221522 ATAGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATTGGGGCCAGCAGC 221463 Query 62505 AAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGA 62564 | || || || | |||| | ||| || || || || ||||||| | ||| || Sbjct 221462 AGGCTGTTCCTCACGCCGTGCTTGGCGATCTTCTCCTTCAGCAGTTCCCAGTCCCACAGG 221403 Query 62565 TCCGACGG-----TACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACG 62619 | | || | | || || || || || || || ||| | | Sbjct 221402 CCGGTGGGCGTCTTCCCCCACATGTCG-----TACTGAAGGATGCCCTTGCTGACAGGAG 221348 Query 62620 ATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATG 62679 | ||| | || || || || || || || |||| || | ||| |||||||| | | Sbjct 221347 AGCCTTCGTAAGTCTCGTAGGGGCCAAGCTCACCAGCCAGCTCACAGCTCGCCTCCAGGG 221288 Query 62680 CACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAA 62739 | |||| || || || |||||||||| | || || ||||| || || || |||| Sbjct 221287 CTGCGTAGTAGATAGTCTCAAAGATCTGGGTGTTCAGCAGCTGTGCCTCAGGACTTTCAA 221228 Query 62740 ATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTC 62799 | || ||| | || || || || || || || || || || || || || || || | Sbjct 221227 AGGGGTAACGCATCAGGATGAAGGCATCTGCCAAACCCTGGACTCCGATTCCTATTGGCC 221168 Query 62800 TATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTT 62859 | || | || || || | || ||||| || | ||||| || ||||| || || || Sbjct 221167 TGTGACGTTTGTTGGACTTCTCGGCTTCAGGTACTGGATAGTAGTTAATGTCGATGATCC 221108 Query 62860 TATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC--- 62916 | || | ||| ||||||| |||||| ||||| |||||| || || || Sbjct 221107 TGTTCAAGTTTTTGACAATAACTTTGGTCACATATGCCAGTTTTTTGAAGTCGTATGTCT 221048 Query 62917 GCCCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCAT 62976 || || | ||| ||||||| | || | || ||||||||||| || |||||||||| Sbjct 221047 GCTCAGGGGTAACATACATGTTGAGAGCGATGGAAGCCAGATTACAGACCGCTACCTCAT 220988 Query 62977 --TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAA 63034 | || | | |||| | | || ||||| || || || || ||||| ||||| | Sbjct 220987 CTTTGC--CGGTGTATTCGACAACTTCTGTGCAGAGGTTGCTGCATTTGATGGTTCCCAG 220930 Query 63035 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGT 63094 || || || || ||||| ||| || || || || || || ||| |||| |||||||| Sbjct 220929 GTTCTGCTGGTTGCTCTTCCGGTTGCAGGCGTCTTTGTACAGCATGTATGGTGTACCAGT 220870 Query 63095 TTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGATTTGT 63153 ||| |||| || || ||||| || | ||| | | || ||||||| | | |||| Sbjct 220869 TTCTGTCTGGGACTCGATAATGGCGTACCACAGCTGCT-GAGCCTTCACCACTCGTTTGA 220811 Query 63154 ATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGT 63213 |||| || |||| ||| || || | | |||||||| || ||||| | | Sbjct 220810 CCCTCCCCTCCTTTTCATATTTGGTGTAGAGTTCCTCGAACTCCTCCCCCCAGCACTCAT 220751 Query 63214 CCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63273 ||| || ||| || || | |||||||||||| ||||| ||| || || ||||| | Sbjct 220750 CCAGTCCAGGGCACTCGTTCGGACACATCAAAGACCAGTCTTGGTTGCTCTCCACTCTCT 220691 Query 63274 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGT 63333 |||| || | || || ||||| | || ||| |||||||| | || || ||||| | Sbjct 220690 TCATGAACAAGTCTGGGATCCACAAGGCATAAAAAAGATCTCTGGCCCTCTGCTCCTCCT 220631 Query 63334 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63393 | ||||| ||||| || || || ||||| | | | |||| | ||||| || |||| || Sbjct 220630 TCCCTGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCAAAGTGCCAGGGCTCCAGGT 220571 Query 63394 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63453 | ||||| | | | || || | ||||| || ||||| || | || | || ||||| | Sbjct 220570 ACATGGCGAAAGCGCCGGGTCTCTTGTTGCCACCCTGGTCGACATAACGTGCCGTGTTGT 220511 Query 63454 TATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGC 63513 | || ||||||| ||| || | | || ||||| | |||||||| || | ||| |||| Sbjct 220510 TGTATACTCTCAGCATGGGGACCAGCCCATTTGAATTGCCATTGGTGCCAGCGATGTAGC 220451 Query 63514 CTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63573 || |||| | ||| || | | | ||||||||| || ||| ||| ||||| | Sbjct 220450 TCCCTGTGGCTCTGATACAGCTGACCGCCACACCTATTCCTCCAGCCGATTTGGAGATGA 220391 Query 63574 ATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTA 63633 || || | || | |||||||| ||||| || ||||| || || ||||| ||| | Sbjct 220390 GGGCACACTGCTTCAGTGTGTCATATATGCCCTCAATGCTGTCGTCCTTCATGGCAAGCA 220331 Query 63634 GAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63693 | || ||||| || | || | | | ||||| |||||||| | |||||||| || | Sbjct 220330 GGAAGCAGCTGGATAGCTGTGGCTGTTTGGTTCCTGCATTAAAAAGTGTAGGAGAGGCAT 220271 Query 63694 GCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATT 63753 | || ||||| || || || || || ||||| |||||||| |||| ||| ||||| | Sbjct 220270 GGGTGAACCACTTCTCTGAGAGCAGGTTGTAGGTCTCAATGGCTGCGTCGATATCGGTTC 220211 Query 63754 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGT 63813 || ||||| | || || | ||| | ||||||||| || | || | | |||| || Sbjct 220210 CGTGGATTCCATCCGCCACTCTCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTGCCGT 220151 Query 63814 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 63873 | || |||| || |||||| | |||| || || || ||||| ||||||| || || | Sbjct 220150 TGATCTTCAGCAGGTAGGACCTCTCCAGGGTCTTGAATCCAAAGAAGTTGTAGGAGAAAT 220091 Query 63874 CTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGG 63933 || |||||||| || |||||||||| || || | | ||| || | | || Sbjct 220090 CTTTGTCGTAAATGATGGCCGAATTGAGGCGGTCTTTGTTCTCAAGAACAATGTTGAGGG 220031 Query 63934 TAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAA 63992 | | ||| || || |||||||| || ||| ||| || | |||||| | | Sbjct 220030 T-TTCCTTGGAGATCATCGGAGAGTGACGTTGATTCAGAGGGTTGATGTAGTTGTACAGG 219972 Query 63993 TCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATT 64052 ||||||||||| ||||| || | || ||||| || ||||| || ||||| | || ||| Sbjct 219971 TCCTCCATCACGTCACTGAACACCTTCTTTGTCTCTTTGTGCAGGTTTGAAACCGCGATT 219912 Query 64053 CTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCT 64112 | || || || |||||||| || || |||| || || |||||| || || || ||| Sbjct 219911 CGTGCAGCAAGGATGGCATAGTCAGGGTGTTTCGTTGTGAGAGTGGCGGCGATCTCTGCT 219852 Query 64113 GCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCATA 64172 ||||||||||| | || || || || || || | || | || || || |||||||| Sbjct 219851 GCCAGAGTGTCGAGCTCCACGGTGGTGACACCGCTGTACAAACCCTGGATCACCTTCATT 219792 Query 64173 GCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAGCACAATTTTCT-AATACG 64231 | || | || |||| | || | ||| | || ||||| || ||||| || || Sbjct 219791 GTAATCTGGGCTGGGTCTACAAAGTCTGAGTTCAGGCTGTAGCA-AAGTTTCTGGATGCG 219733 Query 64232 AGACGTGATTTTATCAAACATGACA 64256 ||| |||||||| |||||||||||| Sbjct 219732 AGAGGTGATTTTGTCAAACATGACA 219708 >seq34 Length=6032531 Score = 93.3 bits (102), Expect = 5e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||| || || || || | ||||| || | || || |||||||||||||| | ||||| Sbjct 778803 CCTCATCCCTGCTGATCAGCTCGTTGGAGTAGGTAAGACCGGGCATTAGGCCCCTCTTTT 778744 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | |||||| | || | ||| ||||| || || |||||||| ||||| || || ||||| | Sbjct 778743 TGAGCCAATAGATAGCAGCAAATGAGCCAGAGAAGAAGATGCCTTCCACAGCTGCAAAAG 778684 Query 33724 CAATAAGTCTCTCTCC 33739 | | || || ||| || Sbjct 778683 CCACAATTCGCTCCCC 778668 >seq1512 Length=3299 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||||||||| || || | ||||| || || || || |||||||| ||||| | ||| | Sbjct 212 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 271 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | ||||| || || | |||||| || || || ||||||||||| || || || || || | Sbjct 272 TCAGCCAGAAGATCGCAGCGAAGGACCCAGAGAAGAAGATTCCCTCCACGGCCGCGAACG 331 Query 33724 C 33724 | Sbjct 332 C 332 >seq334 Length=631087 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||||||||| || || | ||||| || || || || |||||||| ||||| | ||| | Sbjct 411805 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 411864 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | ||||| || || | |||||| || || || ||||||||||| || || || || || | Sbjct 411865 TCAGCCAGAAGATCGCAGCGAAGGACCCAGAGAAGAAGATTCCCTCCACGGCCGCGAACG 411924 Query 33724 C 33724 | Sbjct 411925 C 411925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629655248768160