Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq334 84.2 2e-11 seq1512 82.4 7e-11 >seq334 Length=631087 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 |||||||| || || || || || || || || | |||||||||| |||| || || Sbjct 411807 TCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCTTC 411866 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | ||| || || ||||| || || ||||| ||||| ||||||||||| || || || || Sbjct 411867 AGCCAGAAGATCGCAGCGAAGGACCCAGAGAAGAAGATTCCCTCCACGGCCGCGAACGCC 411926 Query 11774 ACTACTCTTTCTCC 11787 || || | ||||| Sbjct 411927 ACCACACGCTCTCC 411940 >seq1512 Length=3299 Score = 82.4 bits (90), Expect = 7e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 |||||||| || || || || || || || || | |||||||||| |||| || || Sbjct 214 TCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCTTC 273 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | ||| || || ||||| || || ||||| ||||| ||||||||||| || || || || Sbjct 274 AGCCAGAAGATCGCAGCGAAGGACCCAGAGAAGAAGATTCCCTCCACGGCCGCGAACGCC 333 Query 11774 ACTAC 11778 || || Sbjct 334 ACCAC 338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468404026019680