Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq328 554 6e-153 seq34 111 2e-19 seq1512 87.8 2e-12 seq334 87.8 2e-12 >seq328 Length=840127 Score = 554 bits (614), Expect = 6e-153 Identities = 1325/1992 (67%), Gaps = 23/1992 (1%) Strand=Plus/Minus Query 71049 CTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCT 71108 ||| ||||||||| | || || | | || || ||||| ||| |||| | || Sbjct 221673 CTGGATGGATCCATTGTGAGCTATCAGCTGGTTCTTCATCTCCTCACTCCACAGGCCCCT 221614 Query 71109 CTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCT 71168 ||| || | || | || |||||||||||||| | || || ||||| ||||| || || Sbjct 221613 CTCCGTCAGGTCTTTGAGCAGATGAGGATTAACGATCTGGAACTCTCCGGACAAGACCCT 221554 Query 71169 ACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGC 71228 |||||| || || || ||||| || | ||| | ||||| || || |||| || || || Sbjct 221553 ACGAGTATAGATGTTGCTGGTGTAGGCTTCAATAGACTCGTTGTTGCCCAGGATCTGGGC 221494 Query 71229 AGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGG-- 71286 || || || || ||||| || |||| || || || || || | || ||| | || Sbjct 221493 GGTGGAGGCCGTGGGCATTGGGGCCAGCAGCAGGCTGTTCCTCACGCC--GTGCTTGGCG 221436 Query 71287 ATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNN 71346 || || || || || |||||| | ||| || ||| ||| | | Sbjct 221435 ATCTTCTCCTTCAGCAGTTCCCAGTCCCACAGG-CCGGTGGG-CGTCTTCCCCCACATGT 221378 Query 71347 NNNNNNNNN--ATGCCGTTACTAGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTT 71404 ||||| || || | || ||| | || || ||||| || || | Sbjct 221377 CGTACTGAAGGATGCCCTTGCTGACAGGAGAGCCTTCGTAAGTCTCGTAGGGGCCAAGCT 221318 Query 71405 TTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCT 71464 | || || ||||| |||||||| | ||| | || || || || || || |||| Sbjct 221317 CACCAGCCAGCTCACAGCTCGCCTCCAGGGCTGCGTAGTAGATAGTCTCAAAGATCTGGG 221258 Query 71465 TATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTG 71524 | || || ||||| || || || ||||| || ||| | || || || || |||| Sbjct 221257 TGTTCAGCAGCTGTGCCTCAGGACTTTCAAAGGGGTAACGCATCAGGATGAAGGCATCTG 221198 Query 71525 CTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTG 71584 | || || || || || || || || || ||||| | || || || | || ||||| | Sbjct 221197 CCAAACCCTGGACTCCGATTCCTATTGGCCTGTGACGTTTGTTGGACTTCTCGGCTTCAG 221138 Query 71585 GAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCA 71644 | | ||||| || ||||| || || || | || | ||| |||| || |||||| || Sbjct 221137 GTACTGGATAGTAGTTAATGTCGATGATCCTGTTCAAGTTTTTGACAATAACTTTGGTCA 221078 Query 71645 CATCCTTTAGTTTGAGAAAATCAAATCTCCCATCTA---TTACAAACACGTTCAAGGCAA 71701 ||| ||||| || || || || || | ||| ||| ||| | || | Sbjct 221077 CATATGCCAGTTTTTTGAAGTCGTATGTCTGCTCAGGGGTAACATACATGTTGAGAGCGA 221018 Query 71702 CAGATGCCAGATTACAAACGGCTACCTCAT--TAGCATCGGCATATTGTATAATTTCAGT 71759 || ||||||||||| || |||||||||| | || ||| |||| | || ||| || Sbjct 221017 TGGAAGCCAGATTACAGACCGCTACCTCATCTTTGC--CGGTGTATTCGACAACTTCTGT 220960 Query 71760 GCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGC 71819 ||| || || || || ||||||||||| | || || || || ||||| ||| || || Sbjct 220959 GCAGAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTGGTTGCTCTTCCGGTTGCAGGC 220900 Query 71820 ATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 71879 || || || || || | || ||||||||||| |||| || || ||||| || | ||| Sbjct 220899 GTCTTTGTACAGCATGTATGGTGTACCAGTTTCTGTCTGGGACTCGATAATGGCGTACCA 220840 Query 71880 GA-CGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATA 71938 | | || ||||||| | | ||| ||| || |||| |||| || || | Sbjct 220839 CAGCTGCT-GAGCCTTCACCACTCGTTTGACCCTCCCCTCCTTTTCATATTTGGTGTAGA 220781 Query 71939 ATCGTTCGAACTCGTCTCCCCAAGCATTG-TCTAATCCAGGACATTCATTCGGACACATC 71997 | |||||||| || ||||| ||| | || | |||||| || || |||||||||||| Sbjct 220780 GTTCCTCGAACTCCTCCCCCCA-GCACTCATCCAGTCCAGGGCACTCGTTCGGACACATC 220722 Query 71998 AATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 72057 || ||||| ||| | | |||| ||||| || | || || ||||| | || Sbjct 220721 AAAGACCAGTCTTGGTTGCTCTCCACTCTCTTCATGAACAAGTCTGGGATCCACAAGGCA 220662 Query 72058 ATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 72117 ||| |||||||||| || |||||||| || ||||| ||||| || || || ||||| Sbjct 220661 TAAAAAAGATCTCTGGCCCTCTGCTCCTCCTTCCCTGTGTTCTTCTTCAGCTCCAGGAAG 220602 Query 72118 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTT 72177 | | | |||| | ||||| || |||| ||| ||||| | | | || || | ||||| Sbjct 220601 TCAAACACATCAAAGTGCCAGGGCTCCAGGTACATGGCGAAAGCGCCGGGTCTCTTGTTG 220542 Query 72178 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 72237 || ||||| || | || | || ||||| || || ||||||| ||| || | | ||| Sbjct 220541 CCACCCTGGTCGACATAACGTGCCGTGTTGTTGTATACTCTCAGCATGGGGACCAGCCCA 220482 Query 72238 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGAT 72297 || || |||||||| || | ||| ||||| || |||| | ||| ||| | | Sbjct 220481 TTTGAATTGCCATTGGTGCCAGCGATGTAGCTCCCTGTGGCTCTGATACAGCTGACCGCC 220422 Query 72298 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 72357 | ||||||||| || ||| ||| ||||| | || || | || | || ||||| ||| Sbjct 220421 ACACCTATTCCTCCAGCCGATTTGGAGATGAGGGCACACTGCTTCAGTGTGTCATATATG 220362 Query 72358 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 72417 ||||| || || || ||| ||||| ||| || || ||||| || | || | | | Sbjct 220361 CCCTCAATGCTGTCGTCCTTCATGGCAAGCAGGAAGCAGCTGGATAGCTGTGGCTGTTTG 220302 Query 72418 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 72477 ||||| |||||||| | |||||||| || || || ||||| || || || || || ||| Sbjct 220301 GTTCCTGCATTAAAAAGTGTAGGAGAGGCATGGGTGAACCACTTCTCTGAGAGCAGGTTG 220242 Query 72478 TACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAAC 72537 || |||||||| |||| || ||||| | || ||||| |||| || | ||| | | Sbjct 220241 TAGGTCTCAATGGCTGCGTCGATATCGGTTCCGTGGATTCCATCCGCCACTCTCATGAGC 220182 Query 72538 ATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAA 72597 || ||||| || | || | | ||| || || |||| || |||||| | |||| Sbjct 220181 ATGTGCTGCGGCCGCTCGGCCACTTTGCCGTTGATCTTCAGCAGGTAGGACCTCTCCAGG 220122 Query 72598 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGT 72657 || || || ||||| ||||||| || || ||| |||||||| || |||||||||| Sbjct 220121 GTCTTGAATCCAAAGAAGTTGTAGGAGAAATCTTTGTCGTAAATGATGGCCGAATTGAGG 220062 Query 72658 TTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAA-ATAATCGGAGAATGTTT 72716 || || | | ||| || | | ||| | |||| | || |||||||| || Sbjct 220061 CGGTCTTTGTTCTCAAGAACAATGTTGAGGGTT-TCCTTGGAGATCATCGGAGAGTGACG 220003 Query 72717 CCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttt 72776 ||| ||| || | |||||| | | ||||||||||| ||||| || | || || Sbjct 220002 TTGATTCAGAGGGTTGATGTAGTTGTACAGGTCCTCCATCACGTCACTGAACACCTTCTT 219943 Query 72777 tGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 ||| || ||||| || ||||| || || |||| || || || |||||||| || || || Sbjct 219942 TGTCTCTTTGTGCAGGTTTGAAACCGCGATTCGTGCAGCAAGGATGGCATAGTCAGGGTG 219883 Query 72837 TTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTAC 72896 || || || |||||| || || ||||||||||||||||| | || || || || || Sbjct 219882 TTTCGTTGTGAGAGTGGCGGCGATCTCTGCTGCCAGAGTGTCGAGCTCCACGGTGGTGAC 219823 Query 72897 TCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGT 72956 || | || | || ||||| |||||||| | || | || |||| | || | Sbjct 219822 ACCGCTGTACAAACCCTGGATCACCTTCATTGTAATCTGGGCTGGGTCTACAAAGTCTGA 219763 Query 72957 GTTTAAGCCATAACATAATTTTCT-AATACGAGACGTGATTTTATCAAACATAACATTTT 73015 ||| | || || || || ||||| || ||||| |||||||| |||||||| ||| | Sbjct 219762 GTTCAGGCTGTAGCA-AAGTTTCTGGATGCGAGAGGTGATTTTGTCAAACATGACACGCT 219704 Query 73016 CCCGGCATCCAT 73027 | ||| ||||| Sbjct 219703 CTTGGCGTCCAT 219692 >seq34 Length=6032531 Score = 111 bits (122), Expect = 2e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 ||||||| || || || | |||||||| | || || |||||||||||||| | ||||| Sbjct 778803 CCTCATCCCTGCTGATCAGCTCGTTGGAGTAGGTAAGACCGGGCATTAGGCCCCTCTTTT 778744 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | |||||| | |||| |||||||| ||||| |||||||| ||||| || || ||||| | Sbjct 778743 TGAGCCAATAGATAGCAGCAAATGAGCCAGAGAAGAAGATGCCTTCCACAGCTGCAAAAG 778684 Query 42207 CAATAAGTCTCTCTCC 42222 | | || || ||| || Sbjct 778683 CCACAATTCGCTCCCC 778668 >seq1512 Length=3299 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||| ||||| || || | |||||||| || || || |||||||| ||||| | ||| | Sbjct 212 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 271 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| || || | || || || ||||| ||||||||||| || || ||||| || | Sbjct 272 TCAGCCAGAAGATCGCAGCGAAGGACCCAGAGAAGAAGATTCCCTCCACGGCCGCGAACG 331 Query 42207 C 42207 | Sbjct 332 C 332 >seq334 Length=631087 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||| ||||| || || | |||||||| || || || |||||||| ||||| | ||| | Sbjct 411805 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 411864 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| || || | || || || ||||| ||||||||||| || || ||||| || | Sbjct 411865 TCAGCCAGAAGATCGCAGCGAAGGACCCAGAGAAGAAGATTCCCTCCACGGCCGCGAACG 411924 Query 42207 C 42207 | Sbjct 411925 C 411925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670966197092720