Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq405 123 2e-23 >seq405 Length=505804 Score = 123 bits (136), Expect = 2e-23 Identities = 133/175 (76%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||||| ||||||||||| || || | |||||||||||| || ||||| ||||| ||||| Sbjct 92352 CATGTTTGTGTACTCTGCACCAAAGTGCCTCCACTGGAAACCATACACAGGTCCCAGGTC 92411 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 || |||||||||| || || | |||| ||||| | || |||||||| || Sbjct 92412 GCCCTCTTCCCTGTCTGTGAACCCAAGACTGTCCAGGAAGTCCCGTGATCCATTGGCATC 92471 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 25946 ||| ||||| || || |||| ||||||||| |||| ||||| || |||| |||| Sbjct 92472 CCAAATCTTCACACCTTTCTTGGAGAGCTCCTTGGCATTTGTTGATCCCTATGAC 92526 Score = 105 bits (116), Expect = 5e-18 Identities = 114/150 (76%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || |||||||| || || || |||||||||||||| || || ||||| | ||||| Sbjct 89383 GCAATCATGTAGGTAAGAAGTGCATAGCTGGCGATGTTGAATGGCACCCCAAGGCCCATA 89442 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 | | ||||| | |||||| |||||||| || ||||| | || | |||||| ||||| || Sbjct 89443 T-CACCCGAGCGCTGGTACAGCTGACAAGAAAGCTCGCCATCACACACGTAGAACTGGCA 89501 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAG 25655 || || | ||| ||||| ||||| ||||| Sbjct 89502 CAGGGCATGGCAGGGAGGCAGAGCCATAAG 89531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340052113004406