Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq23 89.7 3e-13 seq54 87.8 9e-13 seq326 86.0 3e-12 seq224 82.4 4e-11 >seq23 Length=4207233 Score = 89.7 bits (98), Expect = 3e-13 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| | || |||||| | |||||||||| ||||||| ||||||||||||| || Sbjct 945456 AAAAAAGCGAAGTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCAC 945397 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||| |||| Sbjct 945396 GCTCTAACCAACTGAGCTAACCGGCC 945371 Score = 86.0 bits (94), Expect = 3e-12 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||| || ||| |||||| | |||||||||| ||||||| ||||||||||||| || Sbjct 948482 AAACAAGTAAAGTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCAC 948423 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||| |||| Sbjct 948422 GCTCTAACCAACTGAGCTAACCGGCC 948397 >seq54 Length=2755434 Score = 87.8 bits (96), Expect = 9e-13 Identities = 65/76 (86%), Gaps = 2/76 (3%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 887107 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 887166 Query 11528 CC--GTCGACGATTGT 11541 || || ||||| ||| Sbjct 887167 CCATGTTGACGAGTGT 887182 >seq326 Length=650428 Score = 86.0 bits (94), Expect = 3e-12 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 97145 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 97204 Query 11528 CCGTCGACGAT 11538 ||| || ||| Sbjct 97205 CCGATGATGAT 97215 >seq224 Length=688637 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 665330 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 665389 Query 11528 CC 11529 || Sbjct 665390 CC 665391 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261425479253272