Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq58 156 6e-33 seq37 114 2e-20 >seq58 Length=3006129 Score = 156 bits (172), Expect = 6e-33 Identities = 175/234 (75%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 8741 TTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAG 8800 |||||||| |||| |||||| || || ||||||||||| |||||||| | |||||| Sbjct 2413448 TTGACGATGTCAAAGCCCACGCTGCCTCCAAAGGTGCTGGGCTTCCAGTACTCTGGGGAG 2413389 Query 8801 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTC 8860 |||||| ||| |||| | ||| |||||||| || || ||||||| ||| | ||| || Sbjct 2413388 CAGATGGGGTTTCCCATTAAGCCCTTGAGGGAGAAAGGTGCCCCCATCTCCACCATGGTC 2413329 Query 8861 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACA 8920 || || |||||| ||||||| | || || ||||||| || || | ||| | ||||||| Sbjct 2413328 TCCCCAAAGATGCCGTTGGGCCTTGGTTTCTCCACCAGCAAGCCTGGGTAGAGCTCCACA 2413269 Query 8921 GCCTCGATGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCT 8974 || |||| | |||||| | || | ||| || || ||||| || |||||| Sbjct 2413268 GCATCGACATGTCCGTACATCTCCTTCAGTATTGCGGCCATTTCTTTATCTCCT 2413215 Score = 107 bits (118), Expect = 3e-18 Identities = 176/254 (69%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 9610 TCCCCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGT 9669 || || || || ||||| || |||||||| || ||| ||| || ||| || || || Sbjct 2411705 TCACCAATCATAATGAGCCGTGTGGTCTGGAAGAGTCTTTCATCGTCCCAGTCAGGGTGC 2411646 Query 9670 TCTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATC 9729 | |||| || || ||||| | ||||||||||| ||||| || || || |||||| Sbjct 2411645 ACCTCCTTCAACACGTCACACACCCGGTTGTGTTCCCGCAGCCAAATGGTGGCATACATC 2411586 Query 9730 ATGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGC 9789 ||||||||||| |||||||| || ||||| || || || || | || | ||||| Sbjct 2411585 ATGAGACCAGGGACCAGGCCGAACGCCTCGTGGCCCACGGCGAAGCGGTGAGAGTCGGGG 2411526 Query 9790 ACTTCGGGAGGATAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCA 9849 || | || || |||| ||| | ||| || || | || | ||||| ||||| || Sbjct 2411525 ACATGAGGGGGGTAGAACATATCAACCCCCACTTCCTGTACTGTTGGGGGGTACATATCT 2411466 Query 9850 CCGTCAATAATCTG 9863 || || | ||||| Sbjct 2411465 CCATCCAGGATCTG 2411452 >seq37 Length=2091753 Score = 114 bits (126), Expect = 2e-20 Identities = 131/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 8765 CCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8824 || || ||||||||||| |||||||| | || |||||||| ||| ||| | || Sbjct 2005260 CCCCCAAAGGTGCTGGGCTTCCAGTATTCTGGAGAGCAGATAGGGTTTCCCAGCAAACCC 2005319 Query 8825 TTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8884 || ||||| || ||||| |||| ||| | || |||||||| || |||||||| | ||| Sbjct 2005320 TTCAGGGAGAAGGGAGCACCCATCTCCACCATACTCTCACCAAATATGGCGTTAGAACGT 2005379 Query 8885 GGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCTCCGTAAAG 8940 | || |||| | || ||||| ||| ||||||| ||| || ||||| ||||| || Sbjct 2005380 GTTTTCTCCAGTAGGATTCCGGGGTAAAACTCCAAAGCATCAATGTCCCCGTAGAG 2005435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708342160019680