Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq356 192 9e-45 seq454 187 4e-43 seq2846 159 5e-35 seq695 145 1e-30 seq70 102 1e-17 >seq356 Length=509760 Score = 192 bits (212), Expect = 9e-45 Identities = 181/231 (78%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| ||||||| | ||| || ||||||||||| |||||||||||||| || || Sbjct 196539 CGCTAAGCGACATCGCAAAGTTCTCCGGGATAACATCCAGGGAATCACCAAGCCCGCCAT 196480 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || |||||||| || || ||||| |||||| ||||||| || ||||||| || | Sbjct 196479 CCGCCGCCTGGCTCGCCGAGGCGGAGTGAAGCGTATCTCTGGTCTGATCTATGAGGAAAC 196420 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || |||||| | ||||| ||| ||| || | ||| ||| || ||| ||||| Sbjct 196419 CCGTGGGGTGTTGAAGGTTTTCCTGGAGAACGTGATTCGTGACGCTGTCACCTACACCGA 196360 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAA 16662 |||||| || | ||||| |||||| |||||||| | || ||||| |||| Sbjct 196359 GCACGCAAAGAGAAAGACGGTCACCGCCATGGATGTGGTGTATGCTCTGAA 196309 Score = 190 bits (210), Expect = 3e-44 Identities = 188/243 (77%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| ||||| | | ||| |||||||||||||| |||||||| ||||| || || Sbjct 201527 CGCTAAGCGGCATCGTAAAGTTCTCCGAGATAACATCCAGGGAATCACTAAGCCCGCCAT 201468 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||||||||| | |||||||| |||||| ||||||| || |||| || || | Sbjct 201467 CCGCCGTCTGGCTCGCAGAGGTGGAGTGAAGCGTATCTCTGGTCTGATCTACGAGGAAAC 201408 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || |||||| | ||||| ||| ||| || | ||| ||| || ||| ||||| Sbjct 201407 CCGTGGGGTGTTGAAGGTTTTCCTGGAGAACGTGATTCGTGACGCTGTCACCTACACCGA 201348 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||| |||||| |||||||| | || ||||| |||| | || || Sbjct 201347 GCACGCAAAGAGAAAGACGGTCACCGCCATGGATGTGGTGTATGCTCTGAAGAGACAGGG 201288 Query 16672 CCG 16674 ||| Sbjct 201287 CCG 201285 >seq454 Length=252621 Score = 187 bits (206), Expect = 4e-43 Identities = 202/268 (75%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| || || | | || || ||||||||||| || |||||||| || || || Sbjct 29448 CGCTAAGCGCCACCGTAAAGTCCTCCGTGATAACATCCAGGGCATCACCAAACCCGCCAT 29389 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||||||||| ||||| ||||| |||||| ||||||| || |||||||||||| Sbjct 29388 CCGACGTCTGGCTCGCCGTGGCGGAGTGAAGCGTATCTCTGGCCTGATCTATGAAGAGAC 29329 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || | ||| |||| || ||| |||||||| ||||| || || ||||| Sbjct 29328 CCGTGGGGTGCTCAAGGTCTTTCTGGAGAACGTTATCCGCGATGCCGTCACTTACACCGA 29269 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | |||||||| ||| |||||||| | |||||||| | || | || || Sbjct 29268 GCACGCCAAGAGAAAGACTGTGACCGCCATGGATGTGGTCTATGCGCTCAAGAGGCAGGG 29209 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | | ||||| || ||| | ||| Sbjct 29208 CCGCACCCTGTATGGCTTCGGAGGCTAA 29181 Score = 181 bits (200), Expect = 2e-41 Identities = 201/268 (75%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| || || | | || || ||||||||||| || |||||||| || || || Sbjct 43997 CGCTAAGCGCCACCGTAAAGTCCTCCGTGATAACATCCAGGGCATCACCAAACCCGCCAT 43938 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||||||||| ||||| ||||| |||||| ||||||| || |||||||||||| Sbjct 43937 CCGACGTCTGGCTCGCCGTGGCGGAGTGAAGCGTATCTCTGGCCTGATCTATGAAGAGAC 43878 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || | ||| |||| || ||| |||||||| ||||| || || ||||| Sbjct 43877 CCGTGGGGTGCTCAAGGTCTTTCTGGAGAACGTTATCCGCGATGCCGTCACTTACACCGA 43818 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | || ||||| ||| |||||||| | |||||||| | || | || || Sbjct 43817 GCACGCCAAGAGAAAAACTGTGACCGCCATGGATGTGGTCTATGCGCTCAAGAGGCAGGG 43758 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | | ||||| || ||| | ||| Sbjct 43757 CCGCACCCTGTATGGCTTCGGAGGCTAA 43730 >seq2846 Length=1410 Score = 159 bits (176), Expect = 5e-35 Identities = 181/243 (74%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| ||| || || |||||||| |||||||| ||||| ||||| Sbjct 765 CGCAAAGCGGCACCGCAAGGTTCTCCGCGACAACATCCAGGGAATCACTAAGCCCGCTAT 706 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| |||||||||||||| || ||||| |||||| |||| || ||| |||| || |||| Sbjct 705 CCGGCGTCTGGCTCGTCGCGGCGGAGTGAAGCGTATCTCCGGTTTGATCTACGAGGAGAC 646 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| | ||||| ||| ||| |||| ||| || || |||||| || Sbjct 645 CCGCGGGGTGCTCAAGGTTTTCCTGGAGAACGTGATCCGTGACGCCGTCACCTATACTGA 586 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | |||||||| || ||||||| | || || || |||| | || || Sbjct 585 GCACGCCAAGAGGAAGACTGTGACTGCCATGGACGTGGTTTACGCCCTGAAGAGACAGGG 526 Query 16672 CCG 16674 ||| Sbjct 525 CCG 523 >seq695 Length=32844 Score = 145 bits (160), Expect = 1e-30 Identities = 193/268 (72%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || || | | || ||||| |||||||| || ||||| || || ||||| Sbjct 10652 CGCCAAGCGGCACCGTAAAGTCCTGCGAGACAACATCCAGGGCATCACTAAACCCGCTAT 10593 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||||||||| ||||| || |||||||| |||| || || |||| || |||| Sbjct 10592 CCGCCGTCTGGCTCGGCGTGGCGGCGTCAAGCGGATCTCCGGTCTGATCTACGAGGAGAC 10533 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| | ||||| ||| ||| |||| ||| || || ||| ||||| Sbjct 10532 CCGCGGGGTGCTCAAGGTTTTCCTGGAGAACGTCATCCGTGACGCGGTCACCTACACCGA 10473 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||||||||| ||||||| | || || || |||| | || || Sbjct 10472 GCACGCCAAGAGGAAGACTGTCACGGCCATGGACGTGGTGTACGCGCTGAAGAGGCAGGG 10413 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | | || || |||||| | ||| Sbjct 10412 TCGCACCCTGTACGGCTTTGGAGGGTAA 10385 >seq70 Length=2250409 Score = 102 bits (112), Expect = 1e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||| || || |||||||| ||||||||||| || ||||||| | |||||||||| | || Sbjct 1653988 TCTCCGTGACAACATCCAGGGAATCACCAAACCCACTATCCGGCATCTGGCTCGTTGCGG 1654047 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 |||||| |||| | |||| || || |||| | |||| || || || | ||| ||| Sbjct 1654048 TGGAGTGAAGCTTATCTCCGGTTTCATCTACAAGGAGACCCGCGAGGTGCTCAAGGTCTC 1654107 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 | | ||| || || | ||| || || ||| | |||||||| || | |||| || Sbjct 1654108 CTTGGAGAATGTGATTCGTGACGCCGTCACCTACATTGAGCACGCCAAGAGGAAGATGGT 1654167 Query 16633 CACCTCCATGGATATCGTCTATGC 16656 || | |||||| | ||||| || Sbjct 1654168 GACTGCTATGGATGTGGTCTACGC 1654191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79056345161046