Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17]
20,622 sequences; 684,144,148 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq356 192 9e-45
seq454 187 4e-43
seq2846 159 5e-35
seq695 145 1e-30
seq70 102 1e-17
>seq356
Length=509760
Score = 192 bits (212), Expect = 9e-45
Identities = 181/231 (78%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||| ||||||| | ||| || ||||||||||| |||||||||||||| || ||
Sbjct 196539 CGCTAAGCGACATCGCAAAGTTCTCCGGGATAACATCCAGGGAATCACCAAGCCCGCCAT 196480
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || |||||||| || || ||||| |||||| ||||||| || ||||||| || |
Sbjct 196479 CCGCCGCCTGGCTCGCCGAGGCGGAGTGAAGCGTATCTCTGGTCTGATCTATGAGGAAAC 196420
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| || |||||| | ||||| ||| ||| || | ||| ||| || ||| |||||
Sbjct 196419 CCGTGGGGTGTTGAAGGTTTTCCTGGAGAACGTGATTCGTGACGCTGTCACCTACACCGA 196360
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAA 16662
|||||| || | ||||| |||||| |||||||| | || ||||| ||||
Sbjct 196359 GCACGCAAAGAGAAAGACGGTCACCGCCATGGATGTGGTGTATGCTCTGAA 196309
Score = 190 bits (210), Expect = 3e-44
Identities = 188/243 (77%), Gaps = 0/243 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||| ||||| | | ||| |||||||||||||| |||||||| ||||| || ||
Sbjct 201527 CGCTAAGCGGCATCGTAAAGTTCTCCGAGATAACATCCAGGGAATCACTAAGCCCGCCAT 201468
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| | |||||||| |||||| ||||||| || |||| || || |
Sbjct 201467 CCGCCGTCTGGCTCGCAGAGGTGGAGTGAAGCGTATCTCTGGTCTGATCTACGAGGAAAC 201408
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| || |||||| | ||||| ||| ||| || | ||| ||| || ||| |||||
Sbjct 201407 CCGTGGGGTGTTGAAGGTTTTCCTGGAGAACGTGATTCGTGACGCTGTCACCTACACCGA 201348
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| |||||| |||||||| | || ||||| |||| | || ||
Sbjct 201347 GCACGCAAAGAGAAAGACGGTCACCGCCATGGATGTGGTGTATGCTCTGAAGAGACAGGG 201288
Query 16672 CCG 16674
|||
Sbjct 201287 CCG 201285
>seq454
Length=252621
Score = 187 bits (206), Expect = 4e-43
Identities = 202/268 (75%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||| || || | | || || ||||||||||| || |||||||| || || ||
Sbjct 29448 CGCTAAGCGCCACCGTAAAGTCCTCCGTGATAACATCCAGGGCATCACCAAACCCGCCAT 29389
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| ||||| ||||| |||||| ||||||| || ||||||||||||
Sbjct 29388 CCGACGTCTGGCTCGCCGTGGCGGAGTGAAGCGTATCTCTGGCCTGATCTATGAAGAGAC 29329
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| || | ||| |||| || ||| |||||||| ||||| || || |||||
Sbjct 29328 CCGTGGGGTGCTCAAGGTCTTTCTGGAGAACGTTATCCGCGATGCCGTCACTTACACCGA 29269
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | |||||||| ||| |||||||| | |||||||| | || | || ||
Sbjct 29268 GCACGCCAAGAGAAAGACTGTGACCGCCATGGATGTGGTCTATGCGCTCAAGAGGCAGGG 29209
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | ||||| || ||| | |||
Sbjct 29208 CCGCACCCTGTATGGCTTCGGAGGCTAA 29181
Score = 181 bits (200), Expect = 2e-41
Identities = 201/268 (75%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||| || || | | || || ||||||||||| || |||||||| || || ||
Sbjct 43997 CGCTAAGCGCCACCGTAAAGTCCTCCGTGATAACATCCAGGGCATCACCAAACCCGCCAT 43938
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| ||||| ||||| |||||| ||||||| || ||||||||||||
Sbjct 43937 CCGACGTCTGGCTCGCCGTGGCGGAGTGAAGCGTATCTCTGGCCTGATCTATGAAGAGAC 43878
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| || | ||| |||| || ||| |||||||| ||||| || || |||||
Sbjct 43877 CCGTGGGGTGCTCAAGGTCTTTCTGGAGAACGTTATCCGCGATGCCGTCACTTACACCGA 43818
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | || ||||| ||| |||||||| | |||||||| | || | || ||
Sbjct 43817 GCACGCCAAGAGAAAAACTGTGACCGCCATGGATGTGGTCTATGCGCTCAAGAGGCAGGG 43758
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | ||||| || ||| | |||
Sbjct 43757 CCGCACCCTGTATGGCTTCGGAGGCTAA 43730
>seq2846
Length=1410
Score = 159 bits (176), Expect = 5e-35
Identities = 181/243 (74%), Gaps = 0/243 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| ||| || || |||||||| |||||||| ||||| |||||
Sbjct 765 CGCAAAGCGGCACCGCAAGGTTCTCCGCGACAACATCCAGGGAATCACTAAGCCCGCTAT 706
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| |||||||||||||| || ||||| |||||| |||| || ||| |||| || ||||
Sbjct 705 CCGGCGTCTGGCTCGTCGCGGCGGAGTGAAGCGTATCTCCGGTTTGATCTACGAGGAGAC 646
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| | ||||| ||| ||| |||| ||| || || |||||| ||
Sbjct 645 CCGCGGGGTGCTCAAGGTTTTCCTGGAGAACGTGATCCGTGACGCCGTCACCTATACTGA 586
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | |||||||| || ||||||| | || || || |||| | || ||
Sbjct 585 GCACGCCAAGAGGAAGACTGTGACTGCCATGGACGTGGTTTACGCCCTGAAGAGACAGGG 526
Query 16672 CCG 16674
|||
Sbjct 525 CCG 523
>seq695
Length=32844
Score = 145 bits (160), Expect = 1e-30
Identities = 193/268 (72%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || || | | || ||||| |||||||| || ||||| || || |||||
Sbjct 10652 CGCCAAGCGGCACCGTAAAGTCCTGCGAGACAACATCCAGGGCATCACTAAACCCGCTAT 10593
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| ||||| || |||||||| |||| || || |||| || ||||
Sbjct 10592 CCGCCGTCTGGCTCGGCGTGGCGGCGTCAAGCGGATCTCCGGTCTGATCTACGAGGAGAC 10533
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| | ||||| ||| ||| |||| ||| || || ||| |||||
Sbjct 10532 CCGCGGGGTGCTCAAGGTTTTCCTGGAGAACGTCATCCGTGACGCGGTCACCTACACCGA 10473
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||||||||| ||||||| | || || || |||| | || ||
Sbjct 10472 GCACGCCAAGAGGAAGACTGTCACGGCCATGGACGTGGTGTACGCGCTGAAGAGGCAGGG 10413
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | || || |||||| | |||
Sbjct 10412 TCGCACCCTGTACGGCTTTGGAGGGTAA 10385
>seq70
Length=2250409
Score = 102 bits (112), Expect = 1e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512
||| || || |||||||| ||||||||||| || ||||||| | |||||||||| | ||
Sbjct 1653988 TCTCCGTGACAACATCCAGGGAATCACCAAACCCACTATCCGGCATCTGGCTCGTTGCGG 1654047
Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572
|||||| |||| | |||| || || |||| | |||| || || || | ||| |||
Sbjct 1654048 TGGAGTGAAGCTTATCTCCGGTTTCATCTACAAGGAGACCCGCGAGGTGCTCAAGGTCTC 1654107
Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632
| | ||| || || | ||| || || ||| | |||||||| || | |||| ||
Sbjct 1654108 CTTGGAGAATGTGATTCGTGACGCCGTCACCTACATTGAGCACGCCAAGAGGAAGATGGT 1654167
Query 16633 CACCTCCATGGATATCGTCTATGC 16656
|| | |||||| | ||||| ||
Sbjct 1654168 GACTGCTATGGATGTGGTCTACGC 1654191
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79056345161046
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |