Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq328 576 2e-159 seq34 105 8e-18 seq1512 102 1e-16 seq334 102 1e-16 >seq328 Length=840127 Score = 576 bits (638), Expect = 2e-159 Identities = 1316/1973 (67%), Gaps = 17/1973 (1%) Strand=Plus/Minus Query 62243 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 62302 ||| ||||||||| | || || | | ||||| ||||| ||| |||| | || Sbjct 221673 CTGGATGGATCCATTGTGAGCTATCAGCTGGTTCTTCATCTCCTCACTCCACAGGCCCCT 221614 Query 62303 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 62362 ||| || | || | || ||||| |||||||| | || || ||||| ||||| || || Sbjct 221613 CTCCGTCAGGTCTTTGAGCAGATGAGGATTAACGATCTGGAACTCTCCGGACAAGACCCT 221554 Query 62363 CCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGC 62422 ||||| || || || ||||| || | ||| | ||||| || || |||| || || || Sbjct 221553 ACGAGTATAGATGTTGCTGGTGTAGGCTTCAATAGACTCGTTGTTGCCCAGGATCTGGGC 221494 Query 62423 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGAT 62482 || || || || ||||| || |||| || | || || || | |||| | ||| Sbjct 221493 GGTGGAGGCCGTGGGCATTGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGAT 221434 Query 62483 TTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNN 62542 || || || || ||||||| | ||| || | | || | | Sbjct 221433 CTTCTCCTTCAGCAGTTCCCAGTCCCACAGGCCGGTGGG--CGTCTTCCCCCACATGTCG 221376 Query 62543 T--TGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTC 62600 | || || || || || ||| | || ||| | || || ||||| || || || Sbjct 221375 TACTGAAGGATGCCCTTGCTGACAGGAGAGCCTTCGTAAGTCTCGTAGGGGCCAAGCTCA 221316 Query 62601 TCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTA 62660 |||| || ||||| |||||||| | || |||| || || || || ||||||| | Sbjct 221315 CCAGCCAGCTCACAGCTCGCCTCCAGGGCTGCGTAGTAGATAGTCTCAAAGATCTGGGTG 221256 Query 62661 TTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCT 62720 || || ||||| || | || ||||| || ||| | || || || || || || Sbjct 221255 TTCAGCAGCTGTGCCTCAGGACTTTCAAAGGGGTAACGCATCAGGATGAAGGCATCTGCC 221196 Query 62721 AATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGA 62780 || || || || || || || || || || || | || || || | || ||||| || Sbjct 221195 AAACCCTGGACTCCGATTCCTATTGGCCTGTGACGTTTGTTGGACTTCTCGGCTTCAGGT 221136 Query 62781 ATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACA 62840 | ||||| || ||||| || || || | || | ||| ||||||| |||||| |||| Sbjct 221135 ACTGGATAGTAGTTAATGTCGATGATCCTGTTCAAGTTTTTGACAATAACTTTGGTCACA 221076 Query 62841 TCCTTCAGTTTGAGAAAATCAAATC---GCCCATCTATTACAAACATGTTCAAGGCAACA 62897 | |||||| || || || || || | ||| ||||||| | || | Sbjct 221075 TATGCCAGTTTTTTGAAGTCGTATGTCTGCTCAGGGGTAACATACATGTTGAGAGCGATG 221016 Query 62898 GATGCCAGATTACAAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCAGTGC 62955 || ||||||||||| || |||||||||| | || | | |||| | | || |||| Sbjct 221015 GAAGCCAGATTACAGACCGCTACCTCATCTTTGC--CGGTGTATTCGACAACTTCTGTGC 220958 Query 62956 AAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCAT 63015 | || || || || ||||| ||||| | || || || || ||||| ||| || || | Sbjct 220957 AGAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTGGTTGCTCTTCCGGTTGCAGGCGT 220898 Query 63016 CCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA 63075 | || || || ||| |||| ||||||||||| |||| || || ||||| || | ||| | Sbjct 220897 CTTTGTACAGCATGTATGGTGTACCAGTTTCTGTCTGGGACTCGATAATGGCGTACCACA 220838 Query 63076 -CGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAAT 63134 | || ||||||| | | |||| |||| || |||| ||| || || | | Sbjct 220837 GCTGCT-GAGCCTTCACCACTCGTTTGACCCTCCCCTCCTTTTCATATTTGGTGTAGAGT 220779 Query 63135 CGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAAC 63194 |||||||| || ||||| | |||| |||||| || || | |||||||||||| Sbjct 220778 TCCTCGAACTCCTCCCCCCAGCACTCATCCAGTCCAGGGCACTCGTTCGGACACATCAAA 220719 Query 63195 GACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA 63254 ||||| ||| || || ||||| ||||| || | || || ||||| | || | Sbjct 220718 GACCAGTCTTGGTTGCTCTCCACTCTCTTCATGAACAAGTCTGGGATCCACAAGGCATAA 220659 Query 63255 AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 63314 || |||||||||| || || ||||| || ||||| ||||| || || || ||||| | Sbjct 220658 AAAAGATCTCTGGCCCTCTGCTCCTCCTTCCCTGTGTTCTTCTTCAGCTCCAGGAAGTCA 220599 Query 63315 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63374 | | |||| | ||||| || |||| ||| ||||| | | | || || | ||||| || Sbjct 220598 AACACATCAAAGTGCCAGGGCTCCAGGTACATGGCGAAAGCGCCGGGTCTCTTGTTGCCA 220539 Query 63375 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTT 63434 ||||| || | || | || ||||| || || ||||||| ||| || | | || ||| Sbjct 220538 CCCTGGTCGACATAACGTGCCGTGTTGTTGTATACTCTCAGCATGGGGACCAGCCCATTT 220479 Query 63435 GATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGA 63494 || | |||||||| || | ||| ||||| || |||| | ||| || | | | | Sbjct 220478 GAATTGCCATTGGTGCCAGCGATGTAGCTCCCTGTGGCTCTGATACAGCTGACCGCCACA 220419 Query 63495 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCC 63554 |||||||| || ||| ||| ||||| | || || | || | |||||||| || ||| Sbjct 220418 CCTATTCCTCCAGCCGATTTGGAGATGAGGGCACACTGCTTCAGTGTGTCATATATGCCC 220359 Query 63555 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63614 || ||||| || || ||||| ||| || || ||||| || | || | | | ||| Sbjct 220358 TCAATGCTGTCGTCCTTCATGGCAAGCAGGAAGCAGCTGGATAGCTGTGGCTGTTTGGTT 220299 Query 63615 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63674 || |||||||| | |||||||| || || || ||||| || || || || || ||||| Sbjct 220298 CCTGCATTAAAAAGTGTAGGAGAGGCATGGGTGAACCACTTCTCTGAGAGCAGGTTGTAG 220239 Query 63675 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63734 |||||||| |||| ||| ||||| | || ||||| | || || | ||| | |||| Sbjct 220238 GTCTCAATGGCTGCGTCGATATCGGTTCCGTGGATTCCATCCGCCACTCTCATGAGCATG 220179 Query 63735 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63794 ||||| || | || | | ||| ||| || |||| || |||||| | |||| || Sbjct 220178 TGCTGCGGCCGCTCGGCCACTTTGCCGTTGATCTTCAGCAGGTAGGACCTCTCCAGGGTC 220119 Query 63795 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTA 63854 || || ||||| ||||||| || || ||| |||||||| || |||| ||||| Sbjct 220118 TTGAATCCAAAGAAGTTGTAGGAGAAATCTTTGTCGTAAATGATGGCCGAATTGAGGCGG 220059 Query 63855 TCCTTATATTTGTTAACTATATCCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCC 63913 || || | | ||| || | | ||| | ||| || || |||||||| || Sbjct 220058 TCTTTGTTCTCAAGAACAATGTTGAGGGT-TTCCTTGGAGATCATCGGAGAGTGACGTTG 220000 Query 63914 ATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGT 63973 ||| ||| || | |||||| | | ||||||||||| ||||| || | || ||||| Sbjct 219999 ATTCAGAGGGTTGATGTAGTTGTACAGGTCCTCCATCACGTCACTGAACACCTTCTTTGT 219940 Query 63974 TTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTG 64033 || ||||| || ||||| || || |||| || || || |||||||| || || |||| Sbjct 219939 CTCTTTGTGCAGGTTTGAAACCGCGATTCGTGCAGCAAGGATGGCATAGTCAGGGTGTTT 219880 Query 64034 TGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 64093 || || |||||| || || || |||||||||||||| | || || || || || || Sbjct 219879 CGTTGTGAGAGTGGCGGCGATCTCTGCTGCCAGAGTGTCGAGCTCCACGGTGGTGACACC 219820 Query 64094 ATTATATATTCCTTGAATAACCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTT 64153 | || | || || || |||||||| | || | || |||| | || | ||| Sbjct 219819 GCTGTACAAACCCTGGATCACCTTCATTGTAATCTGGGCTGGGTCTACAAAGTCTGAGTT 219760 Query 64154 TAAGCCATAACATAATTTTCT-AATACGAGACGTGATTTTATCAAACATGACA 64205 | || || || || ||||| || ||||| |||||||| |||||||||||| Sbjct 219759 CAGGCTGTAGCA-AAGTTTCTGGATGCGAGAGGTGATTTTGTCAAACATGACA 219708 >seq34 Length=6032531 Score = 105 bits (116), Expect = 8e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||| || || || || || |||||||| | || || |||||||||||||| | ||||| Sbjct 778803 CCTCATCCCTGCTGATCAGCTCGTTGGAGTAGGTAAGACCGGGCATTAGGCCCCTCTTTT 778744 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | |||||| | || | ||| ||||| ||||| |||||||| ||||| || || ||||| | Sbjct 778743 TGAGCCAATAGATAGCAGCAAATGAGCCAGAGAAGAAGATGCCTTCCACAGCTGCAAAAG 778684 Query 33446 CAATAAGTCTCTCTCC 33461 | | || || ||| || Sbjct 778683 CCACAATTCGCTCCCC 778668 >seq1512 Length=3299 Score = 102 bits (112), Expect = 1e-16 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||||||||| || || || |||||||| || || || |||||||| ||||| | ||| | Sbjct 212 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 271 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| || || | |||||| || ||||| ||||||||||| || || || || || | Sbjct 272 TCAGCCAGAAGATCGCAGCGAAGGACCCAGAGAAGAAGATTCCCTCCACGGCCGCGAACG 331 Query 33446 C 33446 | Sbjct 332 C 332 >seq334 Length=631087 Score = 102 bits (112), Expect = 1e-16 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||||||||| || || || |||||||| || || || |||||||| ||||| | ||| | Sbjct 411805 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 411864 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| || || | |||||| || ||||| ||||||||||| || || || || || | Sbjct 411865 TCAGCCAGAAGATCGCAGCGAAGGACCCAGAGAAGAAGATTCCCTCCACGGCCGCGAACG 411924 Query 33446 C 33446 | Sbjct 411925 C 411925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622786619785520