Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq328 210 6e-49 seq405 95.1 3e-14 >seq328 Length=840127 Score = 210 bits (232), Expect = 6e-49 Identities = 631/958 (66%), Gaps = 16/958 (2%) Strand=Plus/Plus Query 363358 ATCAATTATGAGAAGGATCTCGAGTATGATATTTTCGGATATAAGACGATGGAGAAATCC 363417 |||| ||| || || ||| || || | | || |||| ||||| |||||| ||| Sbjct 220075 ATCATTTACGACAAAGATTTCTCCTACAACTTCTTTGGATTCAAGACCCTGGAGAGGTCC 220134 Query 363418 TACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTT 363477 ||||| ||||| || | | | || || |||||||| ||| | ||| | || Sbjct 220135 TACCTGCTGAAGATCAACGGCAAAGTGGCCGAGCGGCCGCAGCACATGCTCATGAGAGTG 220194 Query 363478 GCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCT--TCTAA 363535 || ||| ||||| | | ||| | || || || ||||| || || || || ||| | Sbjct 220195 GCGGATGGAATCCACGGAACCGATATCGACGCAGCCATTGAGACCTACAACCTGCTCTCA 220254 Query 363536 GTGCTCGTGTATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCAC 363595 | | ||| ||||| || ||| | || ||| | | ||||| ||||| | |||| Sbjct 220255 GAGAA-GTGG-TTCACCCATGCCTCTCCTACACTTTTTAATGCAGGAACCAAACAGCCAC 220312 Query 363596 AGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACA 363655 || | || ||||| || || ||||||||||| ||| ||||| || | ||||| Sbjct 220313 AGCTATCCAGCTGCTTCCTGCTTGCCATGAAGGACGACAGCATTGAGGGCATATATGACA 220372 Query 363656 CACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACA 363715 |||| ||| | ||||| || || ||||| || || ||||| ||||| || || | Sbjct 220373 CACTGAAGCAGTGTGCCCTCATCTCCAAATCGGCTGGAGGAATAGGTGTGGCGGTCAGCT 220432 Query 363716 ATGTTCGTGC-ACAGAACAGTTACATTCGC-GGCACAGGGGGATACTCGAATGGGCTGGT 363773 | | | || |||| || ||||| ||| ||||| || | || ||||||||||| Sbjct 220433 GTATCAGAGCCACAGGG-AGCTACAT-CGCTGGCACCAATGGCAATTCAAATGGGCTGGT 220490 Query 363774 TCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCG 363833 |||||||| | || | |||| || || | || |||||||||||||| ||| | Sbjct 220491 CCCCATGCTGAGAGTATACAACAACACGGCACGTTATGTCGACCAGGGTGGCAACAAGAG 220550 Query 363834 CAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGA 363893 || || || || ||||| || ||||| || ||| | ||||| || || || Sbjct 220551 ACCCGGCGCTTTCGCCATGTACCTGGAGCCCTGGCACTTTGATGTGTTTGACTTCCTGGA 220610 Query 363894 GCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTG 363953 ||| ||| ||||| || || ||||| | | || | ||||| || ||||| | || Sbjct 220611 GCTGAAGAAGAACACAGGGAAGGAGGAGCAGAGGGCCAGAGATCTTTTTTATGCCTTGTG 220670 Query 363954 GGTTTCTGACCATTTTATGAAGCGCGTGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCC 364012 | | | ||| || |||||| | |||||| ||| ||| | ||||| | | || | Sbjct 220671 GATCCCAGACTTGTTCATGAAGAGAGTGGAGAGCAACCAAG-ACTGGTCTTTGATGTGTC 220729 Query 364013 CACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTG--CTCTATACGA 364070 | |||| || || || || || ||||| || || | | | ||||| || | Sbjct 220730 CGAACGAGTGCCCTGGACTGGATGAGTGCTGGGGGGAGGAGTTCGAGGAACTCTACACCA 220789 Query 364071 AAAGTATGAATCGGAGGGAAAGGCTCGTAAGA-CAATTCCCGCACAGAAGCTATGGTTTG 364129 || |||||| |||||| ||| || | || | || ||| |||| |||| | Sbjct 220790 AA--TATGAAAAGGAGGG-GAGGGTCAAACGAGTGGTGAAGGCTCAGCAGCTGTGGTACG 220846 Query 364130 CCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCA 364189 |||| || || || |||| || || || ||||| || ||| |||||||||| | |||| Sbjct 220847 CCATTATCGAGTCCCAGACAGAAACTGGTACACCATACATGCTGTACAAAGACGCCTGCA 220906 Query 364190 ACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGA 364249 |||| ||| |||||||||| |||| || || || | |||||||| || || || Sbjct 220907 ACCGGAAGAGCAACCAGCAGAACCTGGGAACCATCAAATGCAGCAACCTCTGCACAGAAG 220966 Query 364250 TTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCT 364307 || | |||||||||| || ||| || || ||||| || || || ||||| || Sbjct 220967 TTGTCGAATACACCGGCAAAGATGAGGTAGCGGTCTGTAATCTGGCTTCCATCGCTCT 221024 >seq405 Length=505804 Score = 95.1 bits (104), Expect = 3e-14 Identities = 124/168 (74%), Gaps = 8/168 (5%) Strand=Plus/Minus Query 111390 ACAAATGCAAATGAACTTGCAGCAAAAAA--TGTAAAAATTTGGGATGGAAATGGATCAC 111447 |||||||| || || || | ||| ||| ||| || |||||||||| |||||||||| Sbjct 92513 ACAAATGCCAAGGAGCTCTC--CAAGAAAGGTGTGAAGATTTGGGATGCCAATGGATCAC 92456 Query 111448 GTGACTTTCTAGATTCAGT--TGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGT 111505 | ||||| || || |||| ||| | |||| ||||| || || || ||||| || Sbjct 92455 GGGACTTCCTGGA--CAGTCTTGGGTTCACAGACAGGGAAGAGGGCGACCTGGGACCTGT 92398 Query 111506 TTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCA 111553 || || || || ||| | |||||||||||||| |||| || |||||| Sbjct 92397 GTATGGTTTCCAGTGGAGGCACTTTGGTGCAGAGTACACAAACATGCA 92350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303009228726404