Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq515 125 5e-24 seq319 113 3e-20 seq105 89.7 3e-13 seq186 87.8 1e-12 seq469 86.0 4e-12 seq377 84.2 1e-11 >seq515 Length=142991 Score = 125 bits (138), Expect = 5e-24 Identities = 131/172 (76%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 6319 ACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACG 6378 ||||||| || | ||| || || ||||||||||||||||| ||||||||| |||||||| Sbjct 105453 ACCCGACCAAGTTTTTTGGTTGTGAACTTGGCGCTCAGACCCAGTTTGATACCAAAAACG 105394 Query 6379 AGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCT 6438 | || | |||||| || ||||| || | | |||| |||||||| | ||||| || | Sbjct 105393 ATCGTTACATCGTCAATGGATCCCACGAGGCGAACAAGTTGCAGGACATGCTTGATGGGT 105334 Query 6439 TTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCT 6490 | || | || ||||||||||||| || || || ||||| || || || || Sbjct 105333 TCATCAGAAAATTTGTGCTGTGTCCCGAGTGTGACAACCCTGAAACTGATCT 105282 >seq319 Length=1032599 Score = 113 bits (124), Expect = 3e-20 Identities = 82/95 (86%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||||| |||| ||||| || |||||||| Sbjct 835920 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGGGGGTAGGTAGGGACAGTGGGAATCTCGT 835979 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||||||||||||||||||||| || Sbjct 835980 TCATCCATTCATGCGCGTCACTAATTAGATGATGA 836014 >seq105 Length=3645435 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| | |||||||||| ||||||| | | Sbjct 449112 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTAAGGTACTTGTTGACTATCGGCCCTGT 449171 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 449172 GCCAGTATTTAGCCTTA 449188 >seq186 Length=3217335 Score = 87.8 bits (96), Expect = 1e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 19951 CTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTA 20010 |||||||||||||||||||||||||||| | ||||| |||| |||||||||||| | Sbjct 2954443 CTCTTCAAAGTTCTTTTCAACTTTCCCTTAAGGTACGTGTTGACTATCGGTCTCGTGCCG 2954384 Query 20011 ATATTTAGCCTTA 20023 |||||||||||| Sbjct 2954383 GTATTTAGCCTTA 2954371 >seq469 Length=167328 Score = 86.0 bits (94), Expect = 4e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| ||||||||||||||||| ||||||| | ||||||||| |||||||||| | Sbjct 42289 CTCTCTGTTCAAAGTTCTTTTCAATTTTCCCTTAAAGTACTTGTTGACTATCGGTCTTGT 42348 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 42349 GCCAGTATTTAGCCTTA 42365 >seq377 Length=297611 Score = 84.2 bits (92), Expect = 1e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 19955 TCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATAT 20014 |||||||||||||||| ||||||| | |||||||||| ||||| ||||||| | | ||| Sbjct 1377 TCAAAGTTCTTTTCAATTTTCCCTTAAGGTACTTGTTTGCTATTGGTCTCGTGCCAGTAT 1436 Query 20015 TTAGCCTTA 20023 ||||||||| Sbjct 1437 TTAGCCTTA 1445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334863017510882