Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17]
20,622 sequences; 684,144,148 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq515 125 5e-24
seq319 113 3e-20
seq105 89.7 3e-13
seq186 87.8 1e-12
seq469 86.0 4e-12
seq377 84.2 1e-11
>seq515
Length=142991
Score = 125 bits (138), Expect = 5e-24
Identities = 131/172 (76%), Gaps = 0/172 (0%)
Strand=Plus/Minus
Query 6319 ACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACG 6378
||||||| || | ||| || || ||||||||||||||||| ||||||||| ||||||||
Sbjct 105453 ACCCGACCAAGTTTTTTGGTTGTGAACTTGGCGCTCAGACCCAGTTTGATACCAAAAACG 105394
Query 6379 AGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCT 6438
| || | |||||| || ||||| || | | |||| |||||||| | ||||| || |
Sbjct 105393 ATCGTTACATCGTCAATGGATCCCACGAGGCGAACAAGTTGCAGGACATGCTTGATGGGT 105334
Query 6439 TTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCT 6490
| || | || ||||||||||||| || || || ||||| || || || ||
Sbjct 105333 TCATCAGAAAATTTGTGCTGTGTCCCGAGTGTGACAACCCTGAAACTGATCT 105282
>seq319
Length=1032599
Score = 113 bits (124), Expect = 3e-20
Identities = 82/95 (86%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||||||||| |||| ||||| || ||||||||
Sbjct 835920 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGGGGGTAGGTAGGGACAGTGGGAATCTCGT 835979
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||||||||||||||||||| ||
Sbjct 835980 TCATCCATTCATGCGCGTCACTAATTAGATGATGA 836014
>seq105
Length=3645435
Score = 89.7 bits (98), Expect = 3e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||||||||||||||||||||||||||| | |||||||||| ||||||| | |
Sbjct 449112 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTAAGGTACTTGTTGACTATCGGCCCTGT 449171
Query 20007 GGTAATATTTAGCCTTA 20023
| | ||||||||||||
Sbjct 449172 GCCAGTATTTAGCCTTA 449188
>seq186
Length=3217335
Score = 87.8 bits (96), Expect = 1e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 19951 CTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTA 20010
|||||||||||||||||||||||||||| | ||||| |||| |||||||||||| |
Sbjct 2954443 CTCTTCAAAGTTCTTTTCAACTTTCCCTTAAGGTACGTGTTGACTATCGGTCTCGTGCCG 2954384
Query 20011 ATATTTAGCCTTA 20023
||||||||||||
Sbjct 2954383 GTATTTAGCCTTA 2954371
>seq469
Length=167328
Score = 86.0 bits (94), Expect = 4e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| ||||||||||||||||| ||||||| | ||||||||| |||||||||| |
Sbjct 42289 CTCTCTGTTCAAAGTTCTTTTCAATTTTCCCTTAAAGTACTTGTTGACTATCGGTCTTGT 42348
Query 20007 GGTAATATTTAGCCTTA 20023
| | ||||||||||||
Sbjct 42349 GCCAGTATTTAGCCTTA 42365
>seq377
Length=297611
Score = 84.2 bits (92), Expect = 1e-11
Identities = 60/69 (87%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 19955 TCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATAT 20014
|||||||||||||||| ||||||| | |||||||||| ||||| ||||||| | | |||
Sbjct 1377 TCAAAGTTCTTTTCAATTTTCCCTTAAGGTACTTGTTTGCTATTGGTCTCGTGCCAGTAT 1436
Query 20015 TTAGCCTTA 20023
|||||||||
Sbjct 1437 TTAGCCTTA 1445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334863017510882
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |