Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq328 100 6e-16 seq169 95.1 2e-14 seq126 95.1 2e-14 seq34 91.5 3e-13 seq225 89.7 1e-12 seq224 89.7 1e-12 seq196 89.7 1e-12 seq173 87.8 4e-12 seq335 86.0 1e-11 >seq328 Length=840127 Score = 100 bits (110), Expect = 6e-16 Identities = 460/724 (64%), Gaps = 13/724 (2%) Strand=Plus/Minus Query 293527 TACTGCATGATACCCTTGCTGGCAGGAGACCCCTCAAAGGTGGGATGGGGGCCATGCTCA 293586 ||||| | ||| ||||||||| ||||||| || || | || | ||||||| ||||| Sbjct 221375 TACTGAAGGATGCCCTTGCTGACAGGAGAGCCTTCGTAAGTCTCGTAGGGGCCAAGCTCA 221316 Query 293587 TCAGAGAGCTCGCAAGATGCCTCAACAGCAGCAAAGTAAATGTGCTCGAAGATCTCACGG 293646 ||| ||||| || ||||| | || || |||| || ||| ||||||| | Sbjct 221315 CCAGCCAGCTCACAGCTCGCCTCCAGGGCTGCGTAGTAGATAGTCTCAAAGATCTGGGTG 221256 Query 293647 TTGAGCTTGCGAGCCTGCTCAGAGTCAAACGGCATCTTCAGCTGGAAGAACACATCCTGC 293706 || ||| | |||| | ||||| || || | ||| ||| |||| | Sbjct 221255 TTCAGCAGCTGTGCCTCAGGACTTTCAAAGGGGTAACGCATCAGGATGAAGGCATCTGCC 221196 Query 293707 AGACCCTGTACACCTACACCAACGGGGCGACGACGCTTGTTGCTCGTCTCTGCCTCGGGA 293766 | |||||| || || | || | || | |||| |||||| | |||| || || || Sbjct 221195 AAACCCTGGACTCCGATTCCTATTGGCCTGTGACGTTTGTTGGACTTCTCGGCTTCAGGT 221136 Query 293767 ACCGCATATGCCATCACATCAATGCTCCTGTCCAGGTTCTTCGTGAGAACCTTG---ACA 293823 || | ||| | | || ||| |||||| || ||| || | ||| ||| ||| Sbjct 221135 ACTGGATAGTAGTTAATGTCGATGATCCTGTTCAAGTTTTTGACAATAACTTTGGTCACA 221076 Query 293824 TGCTTGCGGAGGTCCTCAAAGTCAAATGCAT---CATTCTTGACATAGTTCTTGAGCACG 293880 | ||| || | | ||||| ||| | || | ||||| | ||||| || Sbjct 221075 TA--TGCC-AGTTTTTTGAAGTCGTATGTCTGCTCAGGGGTAACATACATGTTGAGAGCG 221019 Query 293881 ATGCTACCGATGACACACACTGCAGTCTCCTCCTTCGAGGTGTACTCGACAATCTCAGCA 293940 ||| | | | ||| || || ||| || || |||||| ||||||| || | Sbjct 221018 ATGGAAGCCAGATTACAGACCGCTACCTCATCTTTGCCGGTGTATTCGACAACTTCTGTG 220959 Query 293941 CAGAGGTTACTGCCCTTGATGGTGCCCGCATTAGACTGCATGTTCTTGGCATTGACACTG 294000 |||||||| |||| |||||||| ||| || ||| || |||| ||| | Sbjct 220958 CAGAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTGGTTGCTCTTCCGGTTGCAGGCG 220899 Query 294001 TCTTTGTTGAGGACATATGGCATACCCGTTTCAATCTGAGTGGTGACCATGGTGTTCCAG 294060 ||||||| || | ||||| |||| ||||| |||| | || |||| || ||| Sbjct 220898 TCTTTGTACAGCATGTATGGTGTACCAGTTTCTGTCTGGGACTCGATAATGGCGTACCAC 220839 Query 294061 ACATCGCGAGCCTTCACCACGCGCTTTGCCTTCCCCTCAGACTCATACTTGGTGTAAAGC 294120 | | ||||||||||||| || || || ||||||| ||||| |||||||| || Sbjct 220838 AGCTGCTGAGCCTTCACCACTCGTTTGACCCTCCCCTCCTTTTCATATTTGGTGTAGAGT 220779 Query 294121 TCTTCGTATTCCTTGCCATATACATCAGACAGGCCAGGGCACTCGTGAGGGTCAAGTAGA 294180 || ||| | |||| || | ||| ||| ||||||||||||| || | | | Sbjct 220778 TCCTCGAACTCCTCCCCCCAGCACTCATCCAGTCCAGGGCACTCGTTCGGACACATCAAA 220719 Query 294181 GACCA--CTGGGCATCAGTCTCCACGCGCTTCATGAATAGATCATTGACCCACATTGCGT 294238 ||||| || || | ||||||| | ||||||||| | || || ||||| || | Sbjct 220718 GACCAGTCTTGG--TTGCTCTCCACTCTCTTCATGAACAAGTCTGGGATCCACAAGGCAT 220661 Query 294239 AAAA 294242 |||| Sbjct 220660 AAAA 220657 >seq169 Length=1506375 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| | Sbjct 4161 GCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGACC 4220 Query 142564 CCCACATCGGGC 142575 ||||||| |||| Sbjct 4221 CCCACATTGGGC 4232 Score = 93.3 bits (102), Expect = 9e-14 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| | Sbjct 38693 GCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGACC 38752 Query 142564 CCCACATCGGG 142574 ||||||| ||| Sbjct 38753 CCCACATTGGG 38763 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| |||||||||||| ||||||||||| || | Sbjct 1085057 GCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCACAGGGTCGTGGGTTGGACC 1085116 Query 142564 CCCACATCGGGC 142575 |||||||||||| Sbjct 1085117 CCCACATCGGGC 1085128 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||| |||||||||||||||||||||| | ||||||||||| |||||||||||||| Sbjct 1100825 AGCTCGGTTAGCTCAGTCGGTAGAGCATGAAACTCTTAATCTCAGGGTCGTGGGTTCGAC 1100884 Query 142563 CCCCACATCGGGC 142575 ||||||||| ||| Sbjct 1100885 CCCCACATCAGGC 1100897 >seq126 Length=3583832 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| | Sbjct 3355756 GCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGACC 3355697 Query 142564 CCCACATCGGGC 142575 ||||||| |||| Sbjct 3355696 CCCACATTGGGC 3355685 >seq34 Length=6032531 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 3278438 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 3278497 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 3278498 CCCCACGTTGGGC 3278510 >seq225 Length=682704 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 558625 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 558684 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 558685 CCCACGTTGGGC 558696 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 562770 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 562711 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 562710 CCCACGTTGGGC 562699 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 565313 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 565254 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 565253 CCCACGTTGGGC 565242 >seq224 Length=688637 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 686264 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 686323 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 686324 CCCACGTTGGGC 686335 >seq196 Length=1196508 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| ||||||||||||| ||| |||||||||| | Sbjct 135129 GCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTTGTGGGTTCGACC 135070 Query 142564 CCCACATCGGGC 142575 ||||||| |||| Sbjct 135069 CCCACATTGGGC 135058 >seq173 Length=1377031 Score = 87.8 bits (96), Expect = 4e-12 Identities = 67/77 (87%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 142048 CGCATGTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGT 142106 |||| ||||||||||||||||||| |||||| ||||||||||||||| ||| | ||||| Sbjct 133261 CGCA-GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGT 133319 Query 142107 TCGACCCCCGCCAGAGA 142123 |||| |||| |||||| Sbjct 133320 TCGAGTCCCGGCAGAGA 133336 >seq335 Length=762018 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 ||||||||||||||||||| |||||| ||||||||||||||| ||| | ||||||||| Sbjct 581705 GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGTTCGAG 581764 Query 142112 CCCCGCCAGAGA 142123 |||| |||||| Sbjct 581765 TCCCGGCAGAGA 581776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027565225603102