Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq47 190 4e-43 seq346 174 3e-38 seq169 86.0 1e-11 seq126 86.0 1e-11 >seq47 Length=2045465 Score = 190 bits (210), Expect = 4e-43 Identities = 170/209 (81%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || ||||||||||| |||||||| ||||||||||| || | |||||||| | Sbjct 352096 CAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCTTCCA 352155 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||| || || || || || || || ||||| || ||||||||||||||||| || | Sbjct 352156 GCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGA 352215 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTT 68432 |||| ||||||||| ||| |||||||| ||| | || || |||| ||||||||| || Sbjct 352216 TCTTAGCCTTGACGTTCTCAATGGTGTC-GCTAGGCTCGACCTCCAGGGTGATGGTCTTG 352274 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||||||||| ||||| |||||||| Sbjct 352275 CCAGTGAGGGTCTTAACGAAGATCTGCAT 352303 Score = 187 bits (206), Expect = 5e-42 Identities = 169/209 (81%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || ||||||||||| |||||||| || |||||||| || | |||||||| | Sbjct 352324 CAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCA 352383 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||| || || || || || || || ||||| || ||||||||||||||||| || | Sbjct 352384 GCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGA 352443 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTT 68432 |||| ||||||||| ||| |||||||| ||| | || || |||| ||||||||| || Sbjct 352444 TCTTAGCCTTGACGTTCTCAATGGTGTC-GCTAGGCTCGACCTCCAGGGTGATGGTCTTG 352502 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||||||||| ||||| |||||||| Sbjct 352503 CCAGTGAGGGTCTTAACGAAGATCTGCAT 352531 Score = 183 bits (202), Expect = 6e-41 Identities = 186/240 (78%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 68223 TGATTTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATG 68282 ||| |||| | || || | || |||| || | || || ||||||||||| |||||| Sbjct 351837 TGAGTTTACTGCCCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATG 351896 Query 68283 TTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGT 68342 || || |||||||| || | |||||||| | |||||| || || || || || || || Sbjct 351897 TTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGC 351956 Query 68343 TGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCT 68402 ||||| || ||||||||||||||||| || ||||| |||||||| ||| |||||||| Sbjct 351957 TGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTAGCCTTGACATTCTCAATGGTGTC- 352015 Query 68403 GCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| | || || |||| ||||||||| || || ||||||||||| ||||| |||||||| Sbjct 352016 GCTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 352075 Score = 172 bits (190), Expect = 1e-37 Identities = 166/209 (79%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || ||||||||||| |||||||| || |||||||| || | |||||||| | Sbjct 352552 CAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCA 352611 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 ||||| || || || || || || || ||||| || ||||||||||||||||| || | Sbjct 352612 GTTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGA 352671 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTT 68432 |||| ||||||||| ||| |||||||| ||| | || || |||| ||||||||| || Sbjct 352672 TCTTAGCCTTGACGTTCTCAATGGTGTC-GCTGGGCTCGACCTCCAGGGTGATGGTCTTG 352730 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || |||||||| || || || |||||||| Sbjct 352731 CCAGTGAGGGTTTTCACAAAGATCTGCAT 352759 >seq346 Length=431050 Score = 174 bits (192), Expect = 3e-38 Identities = 179/234 (76%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287 ||| |||||||| || || || | || | || || |||||||| ||||||||||| || Sbjct 243679 TTAGTTTCCTCCACGGAGACGGAGCACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTA 243620 Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347 || ||||| || | |||||||| | ||| || || || || ||||| | || ||||| Sbjct 243619 GTCAGAGAGGGTACGGCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTC 243560 Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407 || || ||||||||||| || || || || ||||||||| |||||||||||| || Sbjct 243559 AGGAGGGATGCCTTCCTTATCCTGGATTTTGGCCTTGACGTTCTCGATGGTGTCGCTTGG 243500 Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||| ||||||||| || || || ||||||||||| || |||||||| Sbjct 243499 CTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACAAAGATCTGCAT 243446 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || ||||| |||| ||| || |||||||| || |||||||| || || ||| Sbjct 243444 CCTCCTCTCAGACGCAAGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 243385 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||| || || || || ||||| | || ||||| || || Sbjct 243384 AGGGTACGGCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGG 243325 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||| || || ||||||||||| || ||| |||||||| || || || Sbjct 243324 ATGCCTTCCTTATCCTGGATCTTTGCCTTAACATTCTCAATGGTGTCGCTTGGCTCCACC 243265 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||||||| || || || ||||||||||| || || ||||| Sbjct 243264 TCCAGGGTGATGGTCTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 243218 Score = 156 bits (172), Expect = 8e-33 Identities = 160/208 (77%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || |||||||| || |||||||| || || ||||| || | |||||||| | Sbjct 243197 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCATCTTCCA 243138 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||| || || || || || || || ||||| || || ||||||||||| || || | Sbjct 243137 GCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGA 243078 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 |||||||||| || ||| |||||||| || || || |||| ||||||||| || | Sbjct 243077 TCTTTGCCTTAACATTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTAC 243018 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || ||||||||||| || || ||||| Sbjct 243017 CGGTCAGGGTCTTGACAAAGATTTGCAT 242990 Score = 154 bits (170), Expect = 3e-32 Identities = 162/209 (78%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || |||||||| || |||||||| || ||||| || || | |||||||| | Sbjct 242969 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTACGGCCATCTTCCA 242910 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||| || || || || || || || ||||| || || ||||||||||| || || | Sbjct 242909 GCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGA 242850 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTT 68432 |||||||||| || ||| |||||||| ||| | || || ||||| |||||||| || Sbjct 242849 TCTTTGCCTTAACATTCTCAATGGTGTC-GCTGGGCTCCACCTCCAAAGTGATGGTCTTA 242791 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||||||| || || |||||||| Sbjct 242790 CCAGTCAGGGTCTTCACAAAGATCTGCAT 242762 >seq169 Length=1506375 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 84453 AGCGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 84512 |||||||||||||||||||||| ||||| || ||||||| || ||||||||||||| Sbjct 4158 AGCGCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 4217 Query 84513 AGCCCCACATCGGGC 84527 | |||||||| |||| Sbjct 4218 ACCCCCACATTGGGC 4232 Score = 84.2 bits (92), Expect = 4e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 84453 AGCGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 84512 |||||||||||||||||||||| ||||| || ||||||| || ||||||||||||| Sbjct 38690 AGCGCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 38749 Query 84513 AGCCCCACATCGGG 84526 | |||||||| ||| Sbjct 38750 ACCCCCACATTGGG 38763 >seq126 Length=3583832 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 84453 AGCGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 84512 |||||||||||||||||||||| ||||| || ||||||| || ||||||||||||| Sbjct 3355759 AGCGCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 3355700 Query 84513 AGCCCCACATCGGGC 84527 | |||||||| |||| Sbjct 3355699 ACCCCCACATTGGGC 3355685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921384828785840