Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq328 426 3e-114 seq1512 114 2e-20 seq334 114 2e-20 seq556 87.8 3e-12 seq34 84.2 4e-11 >seq328 Length=840127 Score = 426 bits (472), Expect = 3e-114 Identities = 1073/1608 (67%), Gaps = 72/1608 (4%) Strand=Plus/Minus Query 244010 GAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCC 244069 || || ||||| | || |||||| | ||| | || ||||||||||| | |||| Sbjct 221666 GATCCATTGTGAGCTATCAGCTGGTTCTTCATCTCCTCACTCCACAGGCCC---CTCTCC 221610 Query 244070 ---AGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGC 244126 || | | || ||| || || || | ||| |||||||| |||| || | || Sbjct 221609 GTCAGGTCTTTGAGCAGATGAGGATTAACGATCTGGAACTCTCCGGACAAGACCCTACGA 221550 Query 244127 TGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTG 244186 |||| ||||||| || | || || ||| |||||||||| ||||| || ||| Sbjct 221549 GTATAGATGTTGCTGGTGTAGGCTTCAATAGACTCGTTGTTGCCCAGGATCTGGGCGGTG 221490 Query 244187 CTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGG 244246 || || ||||| || | || |||||| |||||||||||||||||| | ||| Sbjct 221489 GAGGCCGTGGGCATTGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGATCTTC 221430 Query 244247 AGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAG-GTCCTCGCGTTTGAGGCCCCACAT 244305 | ||| | ||||||||||| ||| | | | ||| || |||||||| Sbjct 221429 TCCTTCAGCAGTTCCCAGTCCCACAGGCCGGTGGGCGTCTTC----------CCCCACAT 221380 Query 244306 GTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTC 244365 ||| |||| || | ||||||||||| || ||| ||||| ||| |||||| || Sbjct 221379 GTCGTACTGAAGGATGCCCTTGCTGACAGGAGAGCCTTCGTAAGTCTCGTAGGGGCCAA- 221321 Query 244366 GCGCTGG-GCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCA 244424 || | ||||||| ||||||| | || ||||| ||||||||||| ||||| |||||| Sbjct 221320 GCTCACCAGCCAGCTCACAGCTCGCCTCCAGGGCTGCGTAGTAGATAGTCTCAAAGATCT 221261 Query 244425 TCTTGTTCATGTCGCGGGCCTTGCCGCAGGTG-----AAGGGGATGCCCATCATCATGAA 244479 |||||| || | | |||| |||| |||||| | ||||| ||||| Sbjct 221260 GGGTGTTCA----GCAG-CTGTGCCTCAGGACTTTCAAAGGGGTAACGCATCAGGATGAA 221206 Query 244480 GACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCAT 244539 | | || |||| ||||| || ||||| || || || ||||| || |||||||| | Sbjct 221205 GGCATCTGCCAAACCCTGGACTCCGATTCCTATTGGCCTGTGACGTTTGTTGGACTTCTC 221146 Query 244540 GGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCA- 244598 |||||| || || || || |||| |||||| | | |||| | ||| | || | Sbjct 221145 GGCTTCAGGTACTGGATAGTAGTTAATGTCGATGATCCTGTTCAAGTTTTTGACAATAAC 221086 Query 244599 TGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGA 244658 | || | || | ||||| | |||||||| || || || | Sbjct 221085 TTTGGTC-ACATATGCCAGTTTTTTGAAGTCGTATG-----------TCTGCTCAGGGG- 221039 Query 244659 TCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGT 244718 | ||| || |||||| |||| | ||||| || ||||| || ||||| || | Sbjct 221038 ---TAACATACATGTTGAGAGCGATGGAAGCCAGATTACAGACCGCTACCTCATCTTTGC 220982 Query 244719 TGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGT 244778 |||||| | ||||| || ||||||||||| ||||| |||||||| ||||||| ||| | Sbjct 220981 CGGTGTATTCGACAACTTCTGTGCAGAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCT 220922 Query 244779 GATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCT 244838 | ||| ||| |||||||||||| ||||| |||||| | || || || || || Sbjct 220921 GGTTGCTCTTCCGGTTGCAGGCGTCTTTGTACAGCATGTATGGTGTACCAGTTTCTGTCT 220862 Query 244839 GGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCG-TCCTGCGAGCCTTGCCC 244897 ||| ||| | | || ||| || | | |||||| ||| || | || ||| ||| Sbjct 220861 GGGACTCGATAATGGCGTACCACAGCTGCTGAGCCTTCACCACTCGTTTGACCCTC-CCC 220803 Query 244898 TCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCG 244957 || || || |||||| || |||||||||| |||||| ||| || || || Sbjct 220802 TCCTTTTCATATTTGGTGTAGAGTTCCTCGAACTCCTCCCCCCAGCACTCATCCAGTCCA 220743 Query 244958 GGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAG 245017 |||||| ||| ||||| | | ||| || | | || || |||| |||||| Sbjct 220742 GGGCACTCGTTCGGACACATCAAAGACCAGTCTTGGTTGCTCTCCACTCTCTTCATGAAC 220683 Query 245018 AGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTG 245077 | ||| |||||||| | ||| | || || || |||| ||||||||| ||| || ||| Sbjct 220682 AAGTCTGGGATCCACAAGGCATAAAAAAGATCTCTGGCCCTCTGCTCCTCCTTCCCTGTG 220623 Query 245078 TTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCG 245137 |||||| ||||||||| |||||||| || || | |||||||||||||| ||| | ||| Sbjct 220622 TTCTTCTTCAGCTCCAGGAAGTCAAACACATCAAAGTGCCAGGGCTCCAGGTACATGGCG 220563 Query 245138 AGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC-CATCCTCTCGAGCGCGTTGAAGAT 245196 | |||||||| | ||||||||| |||||||| || | | | || | |||| | | Sbjct 220562 AAAGCGCCGGGTCTCTTGTTGCCACCCTGGTCGACATAACGTGCCGTG-TTGTTGTATAC 220504 Query 245197 GCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCT- 245255 | ||| | || || | || || || | ||| |||||||| |||||| || |||| Sbjct 220503 TCTCAGCATGGGGACCAGCCCATTTGAATTGCCATTGGTGCCAGCGATGTA-GCTCCCTG 220445 Query 245256 TGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGC 245315 || | |||| ||||| | || |||| ||| || || |||||||||||||| | Sbjct 220444 TGGCTCTGATACAGCTGACCGCCACACCTATTCCTCCAGCCGATTTGGAGATGAGGGCAC 220385 Query 245316 AGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGC 245375 | ||| | ||||| ||||||||| |||||||| ||||||| ||||| |||| Sbjct 220384 ACTGCTTCAGTGTGTCATATATGCCCTCAATGCTGTCGTCCTTCATGGCAAGCAGGAAGC 220325 Query 245376 AGGAGGACAGCTGGGGC---TTGG-GGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGG 245431 || ||| ||||| ||| |||| ||||| || || || || || ||| ||| Sbjct 220324 AGCTGGATAGCTGTGGCTGTTTGGTTCCTGCA----TTAAAAAGTGTAGGAGAGGCATGG 220269 Query 245432 GTAAAGTAGCGGCTC-GAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCC 245490 || || | | ||| ||||| | ||| |||| | |||||||| | | || Sbjct 220268 GTGAACCA-CTTCTCTGAGAGCAGGTTGTAGGTCTCAATGGCTGCGTCGATATCGGTTCC 220210 Query 245491 GTGGATCTGCAGGGCGCAC-CTCATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCT--- 245546 |||||| | || ||| |||||||| ||||||| ||| || | || | || Sbjct 220209 GTGGAT-TCCATCCGCCACTCTCATGAGCATGTGCTGCGGC----CGCTCGGCCACTTTG 220155 Query 245547 -CGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAG 245593 || ||| |||| |||||| | ||| || |||||||| |||||| Sbjct 220154 CCGTTGATCTTCAGCAGGTAGGACCTCTCCAGGGTCTTGAATCCAAAG 220107 >seq1512 Length=3299 Score = 114 bits (126), Expect = 2e-20 Identities = 103/127 (81%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765 |||| || || | ||||| ||||| ||||||||||| || ||||||| | ||||||| Sbjct 337 TGGTGGCGTTCGCGGCCGTGGAGGGAATCTTCTTCTCTGGGTCCTTCGCTGCGATCTTCT 278 Query 42766 GGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 |||| ||| ||| ||| | ||||||||| || |||||||| ||||| ||||||||||| Sbjct 277 GGCTGAAGAAGAGAGGCCT-GATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGA 219 Query 42825 GACGAGG 42831 ||||||| Sbjct 218 GACGAGG 212 >seq334 Length=631087 Score = 114 bits (126), Expect = 2e-20 Identities = 103/127 (81%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765 |||| || || | ||||| ||||| ||||||||||| || ||||||| | ||||||| Sbjct 411930 TGGTGGCGTTCGCGGCCGTGGAGGGAATCTTCTTCTCTGGGTCCTTCGCTGCGATCTTCT 411871 Query 42766 GGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 |||| ||| ||| ||| | ||||||||| || |||||||| ||||| ||||||||||| Sbjct 411870 GGCTGAAGAAGAGAGGCCT-GATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGA 411812 Query 42825 GACGAGG 42831 ||||||| Sbjct 411811 GACGAGG 411805 Score = 93.3 bits (102), Expect = 8e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129 |||||||||||| |||||||||||||| ||||||| ||||||||||| || |||||||| Sbjct 410871 CCCCTTCGACTTCATGGAGAACATCTCTCTGGAGGGAAAGACCAACTTCTTTGAGAAGCG 410812 Query 43130 CGTCGCCGACTACCAG 43145 || | ||| |||||| Sbjct 410811 TGTGGGCGAGTACCAG 410796 Score = 86.0 bits (94), Expect = 1e-11 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 |||||||| ||||| |||||| |||| ||| | | ||||||||| ||||||||||||||| Sbjct 412108 CTGTTCAATGCCATTGAGACGTTGCCATGCGTGAGGAAGAAGGCTGACTGGGCGCTCAAC 412049 Query 42669 TGGATCG 42675 ||||||| Sbjct 412048 TGGATCG 412042 >seq556 Length=86812 Score = 87.8 bits (96), Expect = 3e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129 |||||||||||| |||||||||||||| ||||||| ||||||||||| || ||||| || Sbjct 84314 CCCCTTCGACTTCATGGAGAACATCTCTCTGGAGGGAAAGACCAACTTCTTTGAGAAACG 84373 Query 43130 CGTCGCCGACTACCAG 43145 ||| | || |||||| Sbjct 84374 CGTGGGAGAGTACCAG 84389 >seq34 Length=6032531 Score = 84.2 bits (92), Expect = 4e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 42708 GTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGG 42767 || || ||| | || || || |||||||||||||| ||| | || || | |||| ||| Sbjct 778680 GTGGCTTTTGCAGCTGTGGAAGGCATCTTCTTCTCTGGCTCATTTGCTGCTATCTATTGG 778739 Query 42768 CTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGAC 42827 ||||| ||| || |||||||| || |||| ||| ||||| || ||||||||||| Sbjct 778740 CTCAAAAAGAGGGGCCTAATGCCCGGTCTTACCTACTCCAACGAGCTGATCAGCAGGGAT 778799 Query 42828 GAGG 42831 |||| Sbjct 778800 GAGG 778803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944095772962720