Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17]
20,622 sequences; 684,144,148 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq764 98.7 8e-16
seq441 91.5 1e-13
seq388 86.0 5e-12
seq250 86.0 5e-12
seq275 84.2 2e-11
>seq764
Length=23245
Score = 98.7 bits (108), Expect = 8e-16
Identities = 77/88 (88%), Gaps = 3/88 (3%)
Strand=Plus/Plus
Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGG 114387
|| |||||||| ||||||||||| |||| |||||||||||||| |||| | |||| ||||
Sbjct 6159 TGGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTGAGAATGATCAAAGG 6218
Query 114388 AACCAAAACTGATATATTGAGCCATTCG 114415
||||| ||||||| || |||||||||||
Sbjct 6219 AACCATAACTGATCTAATGAGCCATTCG 6246
Score = 98.7 bits (108), Expect = 8e-16
Identities = 77/88 (88%), Gaps = 3/88 (3%)
Strand=Plus/Plus
Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGG 115584
|| |||||||| ||||||||||| |||| |||||||||||||| |||| | |||| ||||
Sbjct 6159 TGGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTGAGAATGATCAAAGG 6218
Query 115585 AACCAAAACTGATATATTGAGCCATTCG 115612
||||| ||||||| || |||||||||||
Sbjct 6219 AACCATAACTGATCTAATGAGCCATTCG 6246
>seq441
Length=499159
Score = 91.5 bits (100), Expect = 1e-13
Identities = 77/91 (85%), Gaps = 3/91 (3%)
Strand=Plus/Minus
Query 115525 CAATGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTA 115581
|| || |||||||| ||||||||||| |||| |||||| ||||||| |||| |||| |
Sbjct 240400 CATTGGCATGTATTAGCTCTAGAATTGCCACAGTTATCTAAGTAACATGAGAGCGATCAA 240341
Query 115582 AGGAACCAAAACTGATATATTGAGCCATTCG 115612
|||||||| ||||||| || |||||||||||
Sbjct 240340 AGGAACCATAACTGATTTAATGAGCCATTCG 240310
Score = 91.5 bits (100), Expect = 1e-13
Identities = 77/91 (85%), Gaps = 3/91 (3%)
Strand=Plus/Minus
Query 114328 CAATGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTA 114384
|| || |||||||| ||||||||||| |||| |||||| ||||||| |||| |||| |
Sbjct 240400 CATTGGCATGTATTAGCTCTAGAATTGCCACAGTTATCTAAGTAACATGAGAGCGATCAA 240341
Query 114385 AGGAACCAAAACTGATATATTGAGCCATTCG 114415
|||||||| ||||||| || |||||||||||
Sbjct 240340 AGGAACCATAACTGATTTAATGAGCCATTCG 240310
>seq388
Length=381714
Score = 86.0 bits (94), Expect = 5e-12
Identities = 74/88 (84%), Gaps = 3/88 (3%)
Strand=Plus/Minus
Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGG 115584
|| |||||||| ||||||||||| |||| |||||||||||||| ||| |||| ||||
Sbjct 349050 TGGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGCGAGAGTGATCAAAGG 348991
Query 115585 AACCAAAACTGATATATTGAGCCATTCG 115612
||||| ||||||| || ||||||||||
Sbjct 348990 AACCATAACTGATTTAAAGAGCCATTCG 348963
Score = 86.0 bits (94), Expect = 5e-12
Identities = 74/88 (84%), Gaps = 3/88 (3%)
Strand=Plus/Minus
Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGG 114387
|| |||||||| ||||||||||| |||| |||||||||||||| ||| |||| ||||
Sbjct 349050 TGGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGCGAGAGTGATCAAAGG 348991
Query 114388 AACCAAAACTGATATATTGAGCCATTCG 114415
||||| ||||||| || ||||||||||
Sbjct 348990 AACCATAACTGATTTAAAGAGCCATTCG 348963
>seq250
Length=2818770
Score = 86.0 bits (94), Expect = 5e-12
Identities = 73/86 (85%), Gaps = 3/86 (3%)
Strand=Plus/Minus
Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGG 115584
|| |||||||| ||||||||||| |||| |||||||||||||| |||| ||| ||||
Sbjct 2209360 TGGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTGAGAGCAATCAAAGG 2209301
Query 115585 AACCAAAACTGATATATTGAGCCATT 115610
||||| ||||||| || |||||||||
Sbjct 2209300 AACCATAACTGATTTAATGAGCCATT 2209275
Score = 86.0 bits (94), Expect = 5e-12
Identities = 73/86 (85%), Gaps = 3/86 (3%)
Strand=Plus/Minus
Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGG 114387
|| |||||||| ||||||||||| |||| |||||||||||||| |||| ||| ||||
Sbjct 2209360 TGGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTGAGAGCAATCAAAGG 2209301
Query 114388 AACCAAAACTGATATATTGAGCCATT 114413
||||| ||||||| || |||||||||
Sbjct 2209300 AACCATAACTGATTTAATGAGCCATT 2209275
>seq275
Length=524581
Score = 84.2 bits (92), Expect = 2e-11
Identities = 73/87 (84%), Gaps = 3/87 (3%)
Strand=Plus/Plus
Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGG 114387
|| |||||||| | | ||||||| |||| |||||||||||||| |||| |||| ||||
Sbjct 398070 TGGCATGTATTAGTTGTAGAATTGCCACAGTTATCCAAGTAACGTGAGAGTGATCAAAGG 398129
Query 114388 AACCAAAACTGATATATTGAGCCATTC 114414
||||| ||||||| || ||||||||||
Sbjct 398130 AACCATAACTGATTTAATGAGCCATTC 398156
Score = 84.2 bits (92), Expect = 2e-11
Identities = 73/87 (84%), Gaps = 3/87 (3%)
Strand=Plus/Plus
Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGG 115584
|| |||||||| | | ||||||| |||| |||||||||||||| |||| |||| ||||
Sbjct 398070 TGGCATGTATTAGTTGTAGAATTGCCACAGTTATCCAAGTAACGTGAGAGTGATCAAAGG 398129
Query 115585 AACCAAAACTGATATATTGAGCCATTC 115611
||||| ||||||| || ||||||||||
Sbjct 398130 AACCATAACTGATTTAATGAGCCATTC 398156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396962606058844
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |