Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq764 98.7 8e-16 seq441 91.5 1e-13 seq388 86.0 5e-12 seq250 86.0 5e-12 seq275 84.2 2e-11 >seq764 Length=23245 Score = 98.7 bits (108), Expect = 8e-16 Identities = 77/88 (88%), Gaps = 3/88 (3%) Strand=Plus/Plus Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGG 114387 || |||||||| ||||||||||| |||| |||||||||||||| |||| | |||| |||| Sbjct 6159 TGGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTGAGAATGATCAAAGG 6218 Query 114388 AACCAAAACTGATATATTGAGCCATTCG 114415 ||||| ||||||| || ||||||||||| Sbjct 6219 AACCATAACTGATCTAATGAGCCATTCG 6246 Score = 98.7 bits (108), Expect = 8e-16 Identities = 77/88 (88%), Gaps = 3/88 (3%) Strand=Plus/Plus Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGG 115584 || |||||||| ||||||||||| |||| |||||||||||||| |||| | |||| |||| Sbjct 6159 TGGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTGAGAATGATCAAAGG 6218 Query 115585 AACCAAAACTGATATATTGAGCCATTCG 115612 ||||| ||||||| || ||||||||||| Sbjct 6219 AACCATAACTGATCTAATGAGCCATTCG 6246 >seq441 Length=499159 Score = 91.5 bits (100), Expect = 1e-13 Identities = 77/91 (85%), Gaps = 3/91 (3%) Strand=Plus/Minus Query 115525 CAATGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTA 115581 || || |||||||| ||||||||||| |||| |||||| ||||||| |||| |||| | Sbjct 240400 CATTGGCATGTATTAGCTCTAGAATTGCCACAGTTATCTAAGTAACATGAGAGCGATCAA 240341 Query 115582 AGGAACCAAAACTGATATATTGAGCCATTCG 115612 |||||||| ||||||| || ||||||||||| Sbjct 240340 AGGAACCATAACTGATTTAATGAGCCATTCG 240310 Score = 91.5 bits (100), Expect = 1e-13 Identities = 77/91 (85%), Gaps = 3/91 (3%) Strand=Plus/Minus Query 114328 CAATGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTA 114384 || || |||||||| ||||||||||| |||| |||||| ||||||| |||| |||| | Sbjct 240400 CATTGGCATGTATTAGCTCTAGAATTGCCACAGTTATCTAAGTAACATGAGAGCGATCAA 240341 Query 114385 AGGAACCAAAACTGATATATTGAGCCATTCG 114415 |||||||| ||||||| || ||||||||||| Sbjct 240340 AGGAACCATAACTGATTTAATGAGCCATTCG 240310 >seq388 Length=381714 Score = 86.0 bits (94), Expect = 5e-12 Identities = 74/88 (84%), Gaps = 3/88 (3%) Strand=Plus/Minus Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGG 115584 || |||||||| ||||||||||| |||| |||||||||||||| ||| |||| |||| Sbjct 349050 TGGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGCGAGAGTGATCAAAGG 348991 Query 115585 AACCAAAACTGATATATTGAGCCATTCG 115612 ||||| ||||||| || |||||||||| Sbjct 348990 AACCATAACTGATTTAAAGAGCCATTCG 348963 Score = 86.0 bits (94), Expect = 5e-12 Identities = 74/88 (84%), Gaps = 3/88 (3%) Strand=Plus/Minus Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGG 114387 || |||||||| ||||||||||| |||| |||||||||||||| ||| |||| |||| Sbjct 349050 TGGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGCGAGAGTGATCAAAGG 348991 Query 114388 AACCAAAACTGATATATTGAGCCATTCG 114415 ||||| ||||||| || |||||||||| Sbjct 348990 AACCATAACTGATTTAAAGAGCCATTCG 348963 >seq250 Length=2818770 Score = 86.0 bits (94), Expect = 5e-12 Identities = 73/86 (85%), Gaps = 3/86 (3%) Strand=Plus/Minus Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGG 115584 || |||||||| ||||||||||| |||| |||||||||||||| |||| ||| |||| Sbjct 2209360 TGGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTGAGAGCAATCAAAGG 2209301 Query 115585 AACCAAAACTGATATATTGAGCCATT 115610 ||||| ||||||| || ||||||||| Sbjct 2209300 AACCATAACTGATTTAATGAGCCATT 2209275 Score = 86.0 bits (94), Expect = 5e-12 Identities = 73/86 (85%), Gaps = 3/86 (3%) Strand=Plus/Minus Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGG 114387 || |||||||| ||||||||||| |||| |||||||||||||| |||| ||| |||| Sbjct 2209360 TGGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTGAGAGCAATCAAAGG 2209301 Query 114388 AACCAAAACTGATATATTGAGCCATT 114413 ||||| ||||||| || ||||||||| Sbjct 2209300 AACCATAACTGATTTAATGAGCCATT 2209275 >seq275 Length=524581 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/87 (84%), Gaps = 3/87 (3%) Strand=Plus/Plus Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGG 114387 || |||||||| | | ||||||| |||| |||||||||||||| |||| |||| |||| Sbjct 398070 TGGCATGTATTAGTTGTAGAATTGCCACAGTTATCCAAGTAACGTGAGAGTGATCAAAGG 398129 Query 114388 AACCAAAACTGATATATTGAGCCATTC 114414 ||||| ||||||| || |||||||||| Sbjct 398130 AACCATAACTGATTTAATGAGCCATTC 398156 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/87 (84%), Gaps = 3/87 (3%) Strand=Plus/Plus Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGG 115584 || |||||||| | | ||||||| |||| |||||||||||||| |||| |||| |||| Sbjct 398070 TGGCATGTATTAGTTGTAGAATTGCCACAGTTATCCAAGTAACGTGAGAGTGATCAAAGG 398129 Query 115585 AACCAAAACTGATATATTGAGCCATTC 115611 ||||| ||||||| || |||||||||| Sbjct 398130 AACCATAACTGATTTAATGAGCCATTC 398156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396962606058844