Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq346 116 4e-21 seq47 116 4e-21 >seq346 Length=431050 Score = 116 bits (128), Expect = 4e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| ||||| | || || || ||||| |||||||| || | || ||| || | ||| Sbjct 243657 AGCACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGGGTACGGCCATCT 243598 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||| || || ||| | ||||| ||||||||||| ||||| || ||||| || || Sbjct 243597 TCCAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTATCC 243538 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| ||| || ||| | || || | | ||||| || | || | |||| Sbjct 243537 TGGATTTTGGCCTTGACGTTCTCGATGGTGTCGCTTGGCTCCACCTCCAGGGTGATGGTC 243478 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||| || || || || || ||||| Sbjct 243477 TTGCCGGTCAGGGTCTTGACAAAGATCTGCAT 243446 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | || ||| || | ||||| ||||| || || Sbjct 243414 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCATCTTCCAGCTGTTTTCCA 243355 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||| ||||||||||| ||||| || ||||| || || || || ||| ||| Sbjct 243354 GCAAAGATGAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTTGCCTTA 243295 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| ||| | || || | | ||||| || | || | |||||| ||||||| || Sbjct 243294 ACATTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTC 243235 Query 64427 TTTACGAAAATTTGCAT 64443 || || || |||||||| Sbjct 243234 TTGACAAAGATTTGCAT 243218 >seq47 Length=2045465 Score = 116 bits (128), Expect = 4e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || || ||||| || |||||||| || | || |||||| | ||| Sbjct 351864 AGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 351923 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| | || |||| ||||||||| || ||||| ||||| || || Sbjct 351924 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCC 351983 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| ||| | || || | || || || || | || | |||| Sbjct 351984 TGGATCTTAGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTC 352043 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | || || ||||| || ||||| Sbjct 352044 TTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 352075 Score = 113 bits (124), Expect = 5e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || || ||||| || ||||||||||| | || |||||| | ||| Sbjct 352092 AGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCT 352151 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| | || |||| ||||||||| || ||||| ||||| || || Sbjct 352152 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCC 352211 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || ||| | || || | | || || || | || | |||| Sbjct 352212 TGGATCTTAGCCTTGACGTTCTCAATGGTGTCGCTAGGCTCGACCTCCAGGGTGATGGTC 352271 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | || || ||||| || ||||| Sbjct 352272 TTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 352303 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || || ||||| || |||||||| || | || |||||| | ||| Sbjct 352320 AGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 352379 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| | || |||| ||||||||| || ||||| ||||| || || Sbjct 352380 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCC 352439 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || ||| | || || | | || || || | || | |||| Sbjct 352440 TGGATCTTAGCCTTGACGTTCTCAATGGTGTCGCTAGGCTCGACCTCCAGGGTGATGGTC 352499 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | || || ||||| || ||||| Sbjct 352500 TTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 352531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499516004061680