Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq346 107 2e-18 seq328 98.7 1e-15 seq47 89.7 5e-13 >seq346 Length=431050 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || |||||| || | || | | | |||||||| || ||||||||||| Sbjct 243444 CCTCCTCTCAGACGCAAGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 243385 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || || ||||| || | | |||| |||||||| ||||| ||||| Sbjct 243384 AGGGTACGGCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGG 243325 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| || || ||| ||| || | | || | ||||||| | | ||||||| Sbjct 243324 ATGCCTTCCTTATCCTGGATCTTTGCCTTAACATTCTCAATGGTGTCGCTTGGCTCCACC 243265 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || ||||| ||||| || || ||||| || ||||| Sbjct 243264 TCCAGGGTGATGGTCTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 243218 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || ||| | || | ||| | | | |||||||| || |||||||||||| Sbjct 242988 CCTCCTCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 242929 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || || || || || | | |||| || | ||| ||||| ||||| Sbjct 242928 AGGGTACGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 242869 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| || || ||| ||| || | | || | ||||||| | | ||||||| Sbjct 242868 ATGCCTTCCTTATCCTGGATCTTTGCCTTAACATTCTCAATGGTGTCGCTGGGCTCCACC 242809 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || ||||||||||| || || ||||| |||||||| Sbjct 242808 TCCAAAGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 242762 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || | ||| | | | ||||||||||| ||||||||||| Sbjct 243672 CCTCCACGGAGACGGAGCACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAG 243613 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || || ||||| || | | |||| |||||||| ||||| ||||| Sbjct 243612 AGGGTACGGCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGG 243553 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| || || |||||| || | | || | ||||||| | | ||||||| Sbjct 243552 ATGCCTTCCTTATCCTGGATTTTGGCCTTGACGTTCTCGATGGTGTCGCTTGGCTCCACC 243493 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || ||||| || || ||||| |||||||| Sbjct 243492 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACAAAGATCTGCAT 243446 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || ||| | || | ||| | | | |||||||| || ||||||||||| Sbjct 243216 CCTCCTCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 243157 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || || || || || | | |||| || | ||| ||||| ||||| Sbjct 243156 AGGGTACGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 243097 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| || || ||| ||| || | | || | ||||||| | | ||||||| Sbjct 243096 ATGCCTTCCTTATCCTGGATCTTTGCCTTAACATTCTCAATGGTGTCGCTTGGCTCCACC 243037 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || ||||| ||||| || || ||||| || ||||| Sbjct 243036 TCCAGGGTGATGGTCTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 242990 >seq328 Length=840127 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 153597 GCAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCG 153656 || || || |||||||||||||| || ||| || | || |||| | || | || Sbjct 221021 GCGATGGAAGCCAGATTACAGACCGCTACCTCATCTTTGCCGGTGTATTCGACAACTTCT 220962 Query 153657 GCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCAC 153716 | |||||||||||||||||| ||| |||| || ||||| ||||| || || ||||| Sbjct 220961 GTGCAGAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTGGTTGCTCTTCCGGTTGCAG 220902 Query 153717 GCGTCTTTGAAGAGCATGTACGGT 153740 ||||||||| | |||||||| ||| Sbjct 220901 GCGTCTTTGTACAGCATGTATGGT 220878 >seq47 Length=2045465 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || | || ||||| || | ||| | | | ||||| || || |||||||||||| Sbjct 352532 GCCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGA 352591 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || || ||||| || || | | |||| || | ||| ||||| || || Sbjct 352592 GAGGGTGCGGCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGG 352651 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || || | | || | ||||||| | | ||| || Sbjct 352652 AATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCGAC 352711 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || || ||||| || ||||| ||||| ||||||||| Sbjct 352712 CTCCAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACAAAGATCTGCATG 352760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496134475959840