Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17]
20,622 sequences; 684,144,148 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq328 113 4e-20
seq346 105 6e-18
seq47 84.2 2e-11
>seq328
Length=840127
Score = 113 bits (124), Expect = 4e-20
Identities = 127/170 (75%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 123588 ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAAC 123647
|||||||| | || ||||| || || || |||||||| ||||||||||||||||||
Sbjct 220849 ATTATCGAGTCCCAGACAGAAACTGGTACACCATACATGCTGTACAAAGACGCCTGCAAC 220908
Query 123648 AGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATT 123707
|||| | ||| ||| ||| ||||||| || ||||| || || || ||| | ||| ||
Sbjct 220909 CGGAAGAGCAACCAGCAGAACCTGGGAACCATCAAATGCAGCAACCTCTGCACAGAAGTT 220968
Query 123708 ATCGAATACAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGAT 123757
||||||||| || ||| | || || || |||||| ||||||| ||
Sbjct 220969 GTCGAATACACCGGCAAAGATGAGGTAGCGGTCTGTAATCTGGCTTCCAT 221018
>seq346
Length=431050
Score = 105 bits (116), Expect = 6e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 45112 TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGC 45171
||||||| ||||| | | ||| ||||| || || || ||||||||||| || || ||
Sbjct 243674 TTCCTCCACGGAGACGGAGCACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAG 243615
Query 45172 TGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231
|| ||| ||| |||| |||||||| || | || | || |||||||| || |
Sbjct 243614 AGAGGGTACGGCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAG 243555
Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCG 45290
| |||||||| ||||| || ||||| |||| || | || | ||||||| | |||
Sbjct 243554 GGATGCCTTCCTTATCCTGGATTTTGGCCTTGA-CGTTCTCGATGGTGTCGCTTGGCTCC 243496
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || | || |||||||| || || || ||||| || |||||
Sbjct 243495 ACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACAAAGATCTGCAT 243446
>seq47
Length=2045465
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| ||||| || || || || || ||||| || || ||| || ||| ||| |||
Sbjct 352551 ACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCC 352610
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| ||| || || || | |||| | |||||||| || ||||||||||| || || ||
Sbjct 352611 AGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGG 352670
Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310
|| || |||| || | || | ||||||| | |||||| || || || | || ||
Sbjct 352671 ATCTTAGCCTTGA-CGTTCTCAATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTCTT 352729
Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||| || || ||||| ||||| || |||||
Sbjct 352730 GCCAGTGAGGGTTTTCACAAAGATCTGCAT 352759
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451886684875120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |