Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq328 113 4e-20 seq346 105 6e-18 seq47 84.2 2e-11 >seq328 Length=840127 Score = 113 bits (124), Expect = 4e-20 Identities = 127/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 123588 ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAAC 123647 |||||||| | || ||||| || || || |||||||| |||||||||||||||||| Sbjct 220849 ATTATCGAGTCCCAGACAGAAACTGGTACACCATACATGCTGTACAAAGACGCCTGCAAC 220908 Query 123648 AGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATT 123707 |||| | ||| ||| ||| ||||||| || ||||| || || || ||| | ||| || Sbjct 220909 CGGAAGAGCAACCAGCAGAACCTGGGAACCATCAAATGCAGCAACCTCTGCACAGAAGTT 220968 Query 123708 ATCGAATACAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGAT 123757 ||||||||| || ||| | || || || |||||| ||||||| || Sbjct 220969 GTCGAATACACCGGCAAAGATGAGGTAGCGGTCTGTAATCTGGCTTCCAT 221018 >seq346 Length=431050 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 45112 TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGC 45171 ||||||| ||||| | | ||| ||||| || || || ||||||||||| || || || Sbjct 243674 TTCCTCCACGGAGACGGAGCACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAG 243615 Query 45172 TGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 || ||| ||| |||| |||||||| || | || | || |||||||| || | Sbjct 243614 AGAGGGTACGGCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAG 243555 Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCG 45290 | |||||||| ||||| || ||||| |||| || | || | ||||||| | ||| Sbjct 243554 GGATGCCTTCCTTATCCTGGATTTTGGCCTTGA-CGTTCTCGATGGTGTCGCTTGGCTCC 243496 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | || |||||||| || || || ||||| || ||||| Sbjct 243495 ACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACAAAGATCTGCAT 243446 >seq47 Length=2045465 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || ||||| || || || || || ||||| || || ||| || ||| ||| ||| Sbjct 352551 ACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCC 352610 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||| || || || | |||| | |||||||| || ||||||||||| || || || Sbjct 352611 AGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGG 352670 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || |||| || | || | ||||||| | |||||| || || || | || || Sbjct 352671 ATCTTAGCCTTGA-CGTTCTCAATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTCTT 352729 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || || ||||| ||||| || ||||| Sbjct 352730 GCCAGTGAGGGTTTTCACAAAGATCTGCAT 352759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451886684875120