Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq328 149 1e-30 seq5778 91.5 2e-13 >seq328 Length=840127 Score = 149 bits (164), Expect = 1e-30 Identities = 341/509 (67%), Gaps = 6/509 (1%) Strand=Plus/Minus Query 204103 GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCT 204162 ||| || || |||| || ||||| || || ||||||| | ||||| |||| | Sbjct 221670 GATGGATCCATTGTGAGCTATCAGCTGGTTCTTCATCTCCTCACTCCACAGGCCCCTCTC 221611 Query 204163 GATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCG 204222 |||| || | ||| || || || | |||||| || |||||||||| |||| || Sbjct 221610 CGTCAGGTCTTTGAGCAGATGAGGATTAACGATCTGGAACTCTCCGGACAAGACCCTACG 221551 Query 204223 GGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGT 204282 || | | |||| ||||| | | ||| | | |||||||||||| | ||||| ||||| Sbjct 221550 AGTATAGATGTTGCTGGTGTAGGCTTCAATAGACTCGTTGTTGCCCAGGATCTGGGCGGT 221491 Query 204283 GCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCT 204342 | |||||||||||| || ||||| |||||| ||| | ||| |||| || || | | Sbjct 221490 GGAGGCCGTGGGCATTGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGATCTT 221431 Query 204343 GCGCTTCAGAGAGGT-CCAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACT 204401 |||||| || | |||||| || | |||| || |||||||||||| ||| Sbjct 221430 CTCCTTCAG-CAGTTCCCAGTCCCACAGGCCGGTGGGCGTCTTCCCCCACATGTCGTACT 221372 Query 204402 GAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTG 204461 ||| |||||| | ||||| || ||| | ||| ||| || || | ||| | | Sbjct 221371 GAAGGATGCCCTTGCTGACAGGAGAGCCTTCGTAAGTCTCGTAGGGGCCAAGCTCACCAG 221312 Query 204462 CCAGCTTGCACGAGGCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTGAACGTTTA 204521 |||||| || || ||| ||| ||||| || |||||||||||||| ||| | Sbjct 221311 CCAGCTCACAGCTCGCCTCCAGGGCTGCGTAGTAGATAGTCTCAAAGATCTGGGTGTTCA 221252 Query 204522 --ATCTGGCGGCCTCCGTTCCGTCAAACGCCAGACCCAGCATGGCAAACACGTCCGCCAA 204579 | ||| ||||| | | ||||| | || || || | || | || ||||| Sbjct 221251 GCAGCTG--TGCCTCAGGACTTTCAAAGGGGTAACGCATCAGGATGAAGGCATCTGCCAA 221194 Query 204580 GCCCTGCACTCCGATTCCCAACGGTCTGT 204608 ||||| ||||||||||| | || |||| Sbjct 221193 ACCCTGGACTCCGATTCCTATTGGCCTGT 221165 Score = 104 bits (114), Expect = 4e-17 Identities = 305/461 (66%), Gaps = 12/461 (3%) Strand=Plus/Minus Query 204923 CCCACATGCTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATT 204982 |||| | ||||||||| ||| ||||| |||| ||| ||||||| |||| | || | Sbjct 220934 CCCAGGTTCTGCTGGTTGCTCTTCCGGTTGCAGGCGTCTTTGTACAGCATGTATGGTGTA 220875 Query 204983 CCGTTCTCCATCTGAGA-TCGCAGAATGTGGGTCCACAATTCGCGAGCCT---CCACTTG 205038 || | || |||| || ||| | |||| | ||||| | |||||| ||||| | Sbjct 220874 CCAGTTTCTGTCTGGGACTCG-ATAATGGCGTACCACAGCTGCTGAGCCTTCACCACTCG 220816 Query 205039 CTTCACGTACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTA 205098 || || | |||| | || ||||| ||||| || || | || || || | Sbjct 220815 TTTGAC---CCTCCCCTCCTTTTCATATTTGGTGTAGAGTTCCTCGAACTCCTCCCCCCA 220759 Query 205099 -CACGTCCATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTT 205157 ||| || ||| || || || | || |||||||||| |||||| || | | | Sbjct 220758 GCAC-TCATCCAGTCCAGGGCACTCGTTCGGACACATCAAAGACCAGTCTTGGTTGCTCT 220700 Query 205158 TCACCCTCTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAA 205217 ||| |||| ||| |||| ||| |||||||| | | ||||| ||||| | |||||| Sbjct 220699 CCACTCTCTTCATGAACAAGTCTGGGATCCACAAGGCATAAAAAAGATCTCTGGCCCTCT 220640 Query 205218 TTCCGTCGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCAC 205276 | || | || |||||| |||| ||||| ||| | | | || |||||| Sbjct 220639 GCTCCTCCTTCCCTGTGTTCTTCTTCAGCTCCAGG-AAGTCAAACACATCAAAGTGCCAG 220581 Query 205277 GGCTCTAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGA 205336 ||||| | ||| ||| | ||||| || |||||||| ||||||||||| || || Sbjct 220580 GGCTCCAGGTACATGGCGAAAGCGCCGGGTCTCTTGTTGCCACCCTGGTCGACATAACGT 220521 Query 205337 GTCATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTT 205377 | | | |||| | |||| |||||| || ||||| || || Sbjct 220520 GCCGTGTTGTTGTATACTCTCAGCATGGGGACCAGCCCATT 220480 Score = 98.7 bits (108), Expect = 2e-15 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 203929 GTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCT 203988 ||||||| | |||||||| ||| || || || ||||| ||||||||||||||||| Sbjct 222357 GTGCATGCTGGTCAGTTTGCCATAGTTTGGCTCTGCGATGTGGATGTTCAGAGACTGGCT 222298 Query 203989 TTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTC 204048 ||||| ||||||| | || || |||||||| |||| | |||||||| || || || Sbjct 222297 CTGGTCAATGAAAGCACCACGGTCGGCGGCCATCTTGAGTACTGTCTTCTGGGAGATTTC 222238 Query 204049 CCACACCGTCTT 204060 |||||| || || Sbjct 222237 CCACACAGTTTT 222226 >seq5778 Length=732 Score = 91.5 bits (100), Expect = 2e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 200190 CAGACTGGTTCCGGAGTACATGGACCCTGCAGGATGACCCTTGTAAAAAATATCACGAAG 200249 |||| |||||| | || |||||||| || ||||||||||||||||| |||||| | |||| Sbjct 510 CAGAGTGGTTCAGAAGCACATGGACTCTTCAGGATGACCCTTGTAAGAAATATTATGAAG 569 Query 200250 TGCTCATTATCAACCCCGTTCTATTAGTCCCTCCAACCAA 200289 |||| |||| ||| |||| | || ||||||||||| Sbjct 570 CCATCATGGTCAATCCCATTCTGCTGGTACCTCCAACCAA 609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794950228868320