Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq47 145 8e-30 seq346 122 9e-23 seq1512 102 8e-17 seq334 102 8e-17 seq12338 96.9 3e-15 >seq47 Length=2045465 Score = 145 bits (160), Expect = 8e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||||||| | || |||||| | | | Sbjct 352531 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTCGAGCCTAGC 352472 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| || || |||||| | ||||| Sbjct 352471 GACACCATTGAGAACG-TCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCA 352413 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | || ||||| |||||||| || | ||||||||| ||||||||| Sbjct 352412 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAA 352353 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| || || | || || ||| | || |||||| |||| || ||| Sbjct 352352 CATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGGGGTGGC 352304 Score = 145 bits (160), Expect = 8e-30 Identities = 173/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || || || ||||| ||||| ||||| ||||||||| | || |||||| || Sbjct 352762 AACATGCAGATCTTTGTGAAAACCCTCACTGGCAAGACCATCACCCTGGAGGTCGAGCCC 352703 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | ||||| | | | |||| | || | || |||| ||||| || || |||||| | || Sbjct 352702 AGCGACACCATTGAGAACG-TCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGA 352644 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||| |||| || | || ||||| || ||||| || | ||||||||| |||||| Sbjct 352643 CCAGCAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGCCGCACCCTCTCCGACTA 352584 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||||| || || | || || ||| | || |||||| |||| || ||| Sbjct 352583 CAACATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGGGGTGGC 352532 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| ||| | Sbjct 352075 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCCAGC 352016 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| || || |||||| | ||||| Sbjct 352015 GACACCATTGAGAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAG 351956 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | || ||||| |||||||| || | ||||||||| |||||||||| Sbjct 351955 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 351896 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || || | || || ||| | || |||||| |||| || || Sbjct 351895 ATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGGGGTGG 351849 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||||||| | || |||||| | | | Sbjct 352303 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTCGAGCCTAGC 352244 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| || || |||||| | ||||| Sbjct 352243 GACACCATTGAGAACG-TCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCA 352185 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | || ||||| |||||||| || | ||||||||| ||| ||||| Sbjct 352184 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGATTACAA 352125 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| || || | || || ||| | || |||||| |||| || ||| Sbjct 352124 CATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGGGGTGGC 352076 >seq346 Length=431050 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || || || || ||||||||| | || || ||| | | | Sbjct 243218 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCAAGC 243277 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| | ||| |||| || || || || || || | ||||| Sbjct 243278 GACACCATTGAGAATGTTAAGGCAAAGATCCAGGATAAGGAAGGCATCCCTCCTGACCAG 243337 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | || || ||||||||||| || | || |||||| ||||||||| Sbjct 243338 CAGCGTCTCATCTTTGCTGGAAAACAGCTGGAAGATGGCCGTACCCTCTCTGACTACAAC 243397 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || || || |||| ||||| ||||||| || Sbjct 243398 ATCCAGAAGGAGTCCACCCTCCACCTGGTCTTGCGTCTGAGAGGAGG 243444 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || || ||| | | | Sbjct 243446 ATGCAGATCTTTGTCAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCAAGC 243505 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | ||||||| || || || || || || | ||||| Sbjct 243506 GACACCATCGAGAACG-TCAAGGCCAAAATCCAGGATAAGGAAGGCATCCCTCCTGACCA 243564 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | || || ||||||||||| || | || |||||| |||||||| Sbjct 243565 GCAGCGTCTCATCTTTGCTGGAAAACAGCTGGAAGATGGCCGTACCCTCTCTGACTACAA 243624 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||||||| | || || ||| | ||||| ||| Sbjct 243625 CATCCAAAAGGAGTCCACCCTCCATCTTGTGCTCCGT 243661 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || || || || ||||||||| | || || ||| | | | Sbjct 242990 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCAAGC 243049 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| | ||| |||| || || || || || || | ||||| Sbjct 243050 GACACCATTGAGAATGTTAAGGCAAAGATCCAGGATAAGGAAGGCATCCCTCCTGACCAG 243109 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | || || || |||||||| || | || |||||| ||||||||| Sbjct 243110 CAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGTACCCTCTCTGACTACAAC 243169 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || || ||| | ||||| ||| ||||||| || Sbjct 243170 ATCCAGAAGGAGTCCACCCTCCATCTTGTGCTCCGTCTGAGAGGAGG 243216 Score = 113 bits (124), Expect = 5e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || || || || || || || || || |||||||| | || || ||| || Sbjct 242759 AAGATGCAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACTTTGGAGGTGGAGCCC 242818 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | ||||| | | | | |||| | ||| |||| || || || || || || | ||| Sbjct 242819 AGCGACACCATTGAGAATGTTAAGGCAAAGATCCAGGATAAGGAAGGCATCCCTCCTGAC 242878 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||| |||| || | || || || |||||||| || | || ||||| ||||||| Sbjct 242879 CAGCAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGTACCCTTTCCGACTAC 242938 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| ||||| | || || ||| | ||||| ||| ||||||| || Sbjct 242939 AACATCCAGAAGGAGTCCACCCTCCATCTTGTGCTCCGTCTGAGAGGAGG 242988 >seq1512 Length=3299 Score = 102 bits (112), Expect = 8e-17 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 ||||||| ||| ||||| |||||| ||| |||| ||||||||| ||||| | || | Sbjct 212 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 271 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 | ||||| || || || ||||| || || ||||||| ||||| ||||||||||| | Sbjct 272 TCAGCCAGAAGATCGCAGCGAAGGACCCAGAGAAGAAGATTCCCTCCACGGCCGCGAACG 331 Query 133037 CCACCAGGCGCTCGCC 133052 |||||| ||||| || Sbjct 332 CCACCACACGCTCCCC 347 >seq334 Length=631087 Score = 102 bits (112), Expect = 8e-17 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 ||||||| ||| ||||| |||||| ||| |||| ||||||||| ||||| | || | Sbjct 411805 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 411864 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 | ||||| || || || ||||| || || ||||||| ||||| ||||||||||| | Sbjct 411865 TCAGCCAGAAGATCGCAGCGAAGGACCCAGAGAAGAAGATTCCCTCCACGGCCGCGAACG 411924 Query 133037 CCACCAGGCGCTCGCC 133052 |||||| ||||| || Sbjct 411925 CCACCACACGCTCTCC 411940 Score = 96.9 bits (106), Expect = 3e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338 ||||| || ||||||||||| |||||||||||||| || || |||| |||||| |||| Sbjct 412431 ACCAGGTTCTCGTTGACGATCCCGTCGCTGGCGGCAAAGAACGCCAACACGTGAGAGATG 412490 Query 133339 AAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACC 133398 || | |||||| | ||| | | |||||||| || |||| |||||||||||||| Sbjct 412491 AAGTAGCGCTCCTCGTCCCTTAGAGACTCCCAGTGCTGCTGGTCCATGGACAGGTCCACC 412550 Query 133399 T 133399 | Sbjct 412551 T 412551 Score = 86.0 bits (94), Expect = 6e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||||| ||||||| ||||| || ||||| | ||||||||||||||| || || Sbjct 412218 GTAGGTGTTGATGAGGAGGCTGTACATCTCAGAGTGGATGTTCTCCATGGCGATCTGGAA 412277 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACC 133281 || || || |||| ||||| |||||||||||| || | ||| ||||| ||| Sbjct 412278 ACCATAGAAACACCTGGCCTCCGTCACCTGCACTTCCTGTGTGAAGCGCTCCACC 412332 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 133396 ACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAA 133455 |||||||| ||||||| || |||||||||||||| |||||||| ||| ||||| Sbjct 412629 ACCTCCTCTGCGGTCCAGAAAGACGCCTCGGCTTTCTTGTACATCTGCCAGATGTCGTGG 412688 Query 133456 TATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACAGCGGCTCC 133509 || || ||||| || || ||||| || | ||||| || || |||||||||| Sbjct 412689 TACTGGATGGGGAAGATGACAAAGCGATGAGGGTTGTCCTTCAGCAGCGGCTCC 412742 >seq12338 Length=343 Score = 96.9 bits (106), Expect = 3e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338 ||||| || ||||||||||| |||||||||||||| || || |||| |||||| |||| Sbjct 212 ACCAGGTTCTCGTTGACGATCCCGTCGCTGGCGGCAAAGAACGCCAACACGTGAGAGATG 271 Query 133339 AAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACC 133398 || | |||||| | ||| | | |||||||| || |||| |||||||||||||| Sbjct 272 AAGTAGCGCTCCTCGTCCCTTAGAGACTCCCAGTGCTGCTGGTCCATGGACAGGTCCACC 331 Query 133399 T 133399 | Sbjct 332 T 332 Score = 82.4 bits (90), Expect = 8e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 133169 AGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGC 133228 |||||| ||||||| ||||| || ||||| | ||||||||||||||| || || | Sbjct 1 AGGTGTTGATGAGGAGGCTGTACATCTCAGAGTGGATGTTCTCCATGGCGATCTGGAAAC 60 Query 133229 CGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACC 133281 | || || |||| ||||| |||||||||||| || | ||| ||||| ||| Sbjct 61 CATAGAAACACCTGGCCTCCGTCACCTGCACTTCCTGTGTGAAGCGCTCCACC 113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500043867956480