Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq47 143 6e-29 seq346 132 1e-25 >seq47 Length=2045465 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || ||||||||||| || || |||||||||| || || | |||||||| Sbjct 352095 ACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCTTCC 352154 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || ||||| || ||||||||||| ||||| || Sbjct 352155 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGG 352214 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||||||||||||||| | || || || ||||| | ||||| Sbjct 352215 ATCTTAGCCTTGACGTTCTCAATGGTGTCGCTAGGCTCGACCTCCAGGGTGATGGTCTTG 352274 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 352275 CCAGTGAGGGTCTTAACGAAGATCTGCAT 352303 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || ||||||||||| || || ||||| |||| || || | |||||||| Sbjct 352323 ACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCC 352382 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || ||||| || ||||||||||| ||||| || Sbjct 352383 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGG 352442 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||||||||||||||| | || || || ||||| | ||||| Sbjct 352443 ATCTTAGCCTTGACGTTCTCAATGGTGTCGCTAGGCTCGACCTCCAGGGTGATGGTCTTG 352502 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 352503 CCAGTGAGGGTCTTAACGAAGATCTGCAT 352531 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || ||||||||||| || || ||||| |||| || || | |||||||| Sbjct 351867 ACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCC 351926 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || ||||| || ||||||||||| ||||| || Sbjct 351927 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGG 351986 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| |||||||||||||| || || || ||||| | ||||| Sbjct 351987 ATCTTAGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTG 352046 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 352047 CCAGTGAGGGTCTTAACGAAGATCTGCAT 352075 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || ||||||||||| || || ||||| |||| || || | |||||||| Sbjct 352551 ACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCC 352610 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || || ||||| || | || ||||| || ||||||||||| ||||| || Sbjct 352611 AGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGG 352670 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||||||||||||||| || || || ||||| | ||||| Sbjct 352671 ATCTTAGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTCTTG 352730 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| || || | ||||| Sbjct 352731 CCAGTGAGGGTTTTCACAAAGATCTGCAT 352759 >seq346 Length=431050 Score = 132 bits (146), Expect = 1e-25 Identities = 165/225 (73%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | ||| || ||||| || |||||||| || || || ||||| || | || || Sbjct 243439 TCTCAGACGCAAGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGT 243380 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| ||||| || || || ||||| || || || ||||| ||||| ||||| Sbjct 243379 ACGGCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATGCC 243320 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTC 195095 ||| || || || || ||| ||| || |||||||||||||| ||| ||||| || Sbjct 243319 TTCCTTATCCTGGATCTTTGCCTTAACATTCTCAATGGTGTC---GCTTGGCTCCACCTC 243263 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| || |||| || || || || | |||||| Sbjct 243262 CAGGGTGATGGTCTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 243218 Score = 131 bits (144), Expect = 4e-25 Identities = 157/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || |||||||| ||||| || ||||| || | || || | |||||||| Sbjct 243654 ACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGGGTACGGCCATCTTCC 243595 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || || ||||| || || || ||||| ||||| |||||||| || || || Sbjct 243594 AGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGG 243535 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGGGTAACCGTC 195108 ||||| |||||||||||| |||||||| ||| ||||| || ||||| | ||| Sbjct 243534 ATTTTGGCCTTGACGTTCTCGATGGTGTC---GCTTGGCTCCACCTCCAGGGTGATGGTC 243478 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||| || || || || | ||||| Sbjct 243477 TTGCCGGTCAGGGTCTTGACAAAGATCTGCAT 243446 Score = 127 bits (140), Expect = 5e-24 Identities = 156/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || |||||||| || || || ||||| || | || || | |||||||| Sbjct 243198 ACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCATCTTCC 243139 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || ||||| ||||| |||||||| || || || Sbjct 243138 AGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGG 243079 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGGGTAACCGTC 195108 || ||| ||| || |||||||||||||| ||| ||||| || ||||| | ||| Sbjct 243078 ATCTTTGCCTTAACATTCTCAATGGTGTC---GCTTGGCTCCACCTCCAGGGTGATGGTC 243022 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||| || || || || | |||||| Sbjct 243021 TTACCGGTCAGGGTCTTGACAAAGATTTGCAT 242990 Score = 120 bits (132), Expect = 7e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || |||||||| || || || ||||| |||| ||| || | |||||||| Sbjct 242970 ACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTACGGCCATCTTCC 242911 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || ||||| ||||| |||||||| || || || Sbjct 242910 AGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGG 242851 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || ||| ||| || |||||||||||||| Sbjct 242850 ATCTTTGCCTTAACATTCTCAATGGTGTC 242822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109188453465074