Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17]
20,622 sequences; 684,144,148 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq328 214 2e-50
seq34 84.2 2e-11
>seq328
Length=840127
Score = 214 bits (236), Expect = 2e-50
Identities = 638/977 (65%), Gaps = 8/977 (1%)
Strand=Plus/Minus
Query 47863 TAACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAG 47922
||||| || | || || || || || || |||||||| || |||||||||| | |
Sbjct 221038 TAACATACATGTTGAGAGCGATGGAAGCCAGATTACAGACCGCTACCTCATCTTTGCCGG 220979
Query 47923 TATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGAT 47982
| |||| | | ||| | || || || | |||||||| || |||| || || || |
Sbjct 220978 TGTATTCGACAACTTCTGTGCAGAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTGGT 220919
Query 47983 TATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAG 48042
| | ||| || ||||| ||||| ||||| | ||||| ||||||||| |||| |
Sbjct 220918 TGCTCTTCCGGTTGCAGGCGTCTTTGTACAGCATGTATGGTGTACCAGTTTCTGTCTGGG 220859
Query 48043 ATTCAATGATAGATTTCCAAACAG-TCCT-AGCCTTTATAACAGCTCTAGCTTTATTATC 48100
| || || || | | ||| ||| | || |||||| | || | | | | ||
Sbjct 220858 ACTCGATAATGGCGTACCA--CAGCTGCTGAGCCTTCACCACTCGTTTGACCCTCCCCTC 220801
Query 48101 ATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATA-CACATTATCTAACCCAG 48159
| ||| ||||| || || | | ||| || || ||||| | ||| | ||| | ||||
Sbjct 220800 CTTTTCATATTTGGTGTAGAGTTCCTCGAACTCCTCCCCCCAGCAC-TCATCCAGTCCAG 220742
Query 48160 GACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATA 48219
| || || || ||||||||||| ||||| || | | | | ||||| |||| || |
Sbjct 220741 GGCACTCGTTCGGACACATCAAAGACCAGTCTTGGTTGCTCTCCACTCTCTTCATGAACA 220682
Query 48220 TATCTGGTATCCAAAGAGCTATAAATAA-ATCCCTAGTTCTTAGTTCTTCATTGCCACTA 48278
||||| ||||| | || ||||| || ||| || | || | || || || || |
Sbjct 220681 AGTCTGGGATCCACA-AGGCATAAAAAAGATCTCTGGCCCTCTGCTCCTCCTTCCCTGTG 220623
Query 48279 TTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCC 48338
||| | || || || || ||||| | | |||| ||||| || || | || || ||
Sbjct 220622 TTCTTCTTCAGCTCCAGGAAGTCAAACACATCAAAGTGCCAGGGCTCCAGGTACATGGCG 220563
Query 48339 ATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACT 48398
| | || |||| || || || || || || | ||| | || || ||||| || |||
Sbjct 220562 AAAGCGCCGGGTCTCTTGTTGCCACCCTGGTCGACATAACGTGCCGTGTTGTTGTATACT 220503
Query 48399 CTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTA 48458
|| | ||| ||||| | |||||||| | |||||||| || | || || || || |
Sbjct 220502 CTCAGCATGGGGACCAGCCCATTTGAATTGCCATTGGTGCCAGCGATGTAGCTCCCTGTG 220443
Query 48459 GCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACAC 48518
||||| ||| || | | | |||||| || || ||| ||| || || || ||||||
Sbjct 220442 GCTCTGATACAGCTGACCGCCACACCTATTCCTCCAGCCGATTTGGAGATGAGGGCACAC 220383
Query 48519 CGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAA 48578
| || || || ||||| || || || || || || || |||| | || || ||
Sbjct 220382 TGCTTCAGTGTGTCATATATGCCCTCAATGCTGTCGTCCTTCATGGCAAGCAGGAAGCAG 220323
Query 48579 CTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAAC 48638
|| || | || || || ||||||| |||||| | ||| ||||| ||||| | |||
Sbjct 220322 CTGGATAGCTGTGGCTGTTTGGTTCCTGCATTAAAAAGTGTAGGAGAGGCATGGGTGAAC 220263
Query 48639 CATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATA 48698
|| |||||||| | || || || || ||||| | | || ||||| | || ||
Sbjct 220262 CACTTCTCTGAGAGCAGGTTGTAGGTCTCAATGGCTGCGTCGATATCGGTTCCGTGGATT 220203
Query 48699 CCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTC 48758
|| | || | ||| | ||| | || || | || | | |||| || || |||
Sbjct 220202 CCATCCGCCACTCTCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTGCCGTTGATCTTC 220143
Query 48759 AAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCA 48818
| || || || | |||| || || || ||||| ||||||| || || || || ||
Sbjct 220142 AGCAGGTAGGACCTCTCCAGGGTCTTGAATCCAAAGAAGTTGTAGGAGAAATCTTTGTCG 220083
Query 48819 TTAATAATTGATGAATT 48835
| ||| || | |||||
Sbjct 220082 TAAATGATGGCCGAATT 220066
>seq34
Length=6032531
Score = 84.2 bits (92), Expect = 2e-11
Identities = 93/124 (75%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042
|||| || || || |||| || || || | || | ||| ||||| || || || ||||
Sbjct 778803 CCTCATCCCTGCTGATCAGCTCGTTGGAGTAGGTAAGACCGGGCATTAGGCCCCTCTTTT 778744
Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102
| | ||| | |||| ||||||||| ||||| ||||| || ||||| || ||||||||||
Sbjct 778743 TGAGCCAATAGATAGCAGCAAATGAGCCAGAGAAGAAGATGCCTTCCACAGCTGCAAAAG 778684
Query 19103 CAAC 19106
| ||
Sbjct 778683 CCAC 778680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561963902404080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |