Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq6 188 6e-42 seq243 113 4e-19 seq232 113 4e-19 seq280 98.7 8e-15 >seq6 Length=7362726 Score = 188 bits (208), Expect = 6e-42 Identities = 406/599 (68%), Gaps = 21/599 (4%) Strand=Plus/Minus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || ||||| ||| | || ||||| ||| |||||||| |||| || |||| ||||| Sbjct 3727361 ATTGGTATTGATCTGGGCACCACCTATTCATGTGTTGGGGTTTTCCAGCATGGCAAAGTA 3727302 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 || || ||||||||||| || || ||||| || ||||| ||||| | || || || Sbjct 3727301 GAGATCATTGCCAATGACCAGGGCAACAGGACCACTCCCAGCTATGTGGCCTTTACTGAC 3727242 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTACCAAT 550171 ||||| | |||| ||||| || || | || |||| || || || ||||| Sbjct 3727241 ACTGAGAGGCTCATTGGAGATGCTGCCAAGAACCAGGTTGCCA-TG--AACCCCACCAAC 3727185 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || | |||||||| || ||| | ||||| |||| |||| ||| | ||| ||||| Sbjct 3727184 ACAGTCTTTGATGCCAAGCGTCTTATTGGGAGAAAGTTTAGTGACCCCGTTGTCCAGGCT 3727125 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATAT-----TG 550286 |||||||| | ||||||||| | | |||| | | |||||| || | | || Sbjct 3727124 GATATGAAACTCTGGCCTTTCAAGGTGATTAACGATAATGGAAAGCCCAAAGTCCAGGTG 3727065 Query 550287 AAGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTT 550346 || ||| | | |||| || || | |||||| |||| |||||||||||| Sbjct 3727064 GAG-TACAAAGGTGAGATC----AAGGCCTTCTATCCAGAAGAAATCTCATCTATGGTTC 3727010 Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAG-TTACGGATGCAGTA 550405 || | |||||||| | ||| || | | | || | ||||| | | |||| ||| Sbjct 3727009 TAGTAAAAATGAAGGAGGTAGCTGAGGCCTATCTGGGAC-AGAAGCTGTCAAATGCTGTA 3726951 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465 || || || ||||| ||||| || ||||| || | ||||| || || ||||| || Sbjct 3726950 ATCACAGTGCCAGCTTATTTCAACGACTCTCAGAGGCAAGCCACCAAGGATGCAGGGGTG 3726891 Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 || ||||||| |||||||| | || ||||| || || || || || || | || ||| Sbjct 3726890 ATCTCTGGACTGAATGTTCTGAGAATAATCAACGAGCCCACAGCAGCAGCCATCGCCTAT 3726831 Query 550526 GGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGA---TTGTGGAGG 550581 || ||||||||| ||| ||| | ||||| ||||||||||| | ||||||| Sbjct 3726830 GGCCTTGATAAAGGTAAAAGAGGAGAGCGCAATGTGCTCATCTTTGACCTTGGTGGAGG 3726772 Score = 178 bits (196), Expect = 1e-38 Identities = 345/506 (68%), Gaps = 4/506 (1%) Strand=Plus/Minus Query 552086 AGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAG 552145 |||| ||||| | ||||| ||||| | || |||||||| || ||||| || || ||||| Sbjct 3726414 AGATGCAAAGCTGGATAAGTCCAAGATCCACGAAATTGTCCTGGTTGGCGGCTCCACAAG 3726355 Query 552146 AATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTAAATGAA 552203 |||||||||||||| | | || ||| | || ||| ||||||| | |||| || | Sbjct 3726354 AATTCCTAAAATTCAAAAGCTCTTGCAAGAT-TTCTTT-AATGGTAGAGAATTGAACAAG 3726297 Query 552204 AGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCT 552263 || | || |||||||| ||||| || |||||||| ||| | || || ||||| || Sbjct 3726296 AGCATCAACCCAGATGAAGCTGTGGCTTATGGTGCAGCAGTCCAGGCTGCTATCCTCATG 3726237 Query 552264 GGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTT 552323 || | ||| | || ||||| || | | || | || || |||| || ||||| Sbjct 3726236 GGTGACACTTCCAAGAACGTACAAGATCTACTGCTGCTGGACGTGGCTCCCCTGTCTCTG 3726177 Query 552324 GGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCT 552383 || | || || | ||| || ||||||| || ||| | | ||||| || || || Sbjct 3726176 GGCATTGAGACTGCTGGTGGAGTTATGACACCACTAATCAAACGCAATACCACCATACCC 3726117 Query 552384 TGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAA 552443 || | | | | || || || || ||||||||||| | | ||| ||||| Sbjct 3726116 ACCAAGCAGACCCAGATCTTCTCCACATACTCAGATAATCAGCCAGGTGTGCTGATTCAG 3726057 Query 552444 ATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTA 552503 | ||||| || || ||| | || || || || || | || || | ||| | | Sbjct 3726056 GTGTTTGAGGGCGAGAGAGCCATGACCAAGGACAACAACCTGCTGGGCAAGTTTGAGCTC 3725997 Query 552504 GAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGAT 552563 |||||| |||||||| ||||| || ||||| || | || || ||||| || |||||| Sbjct 3725996 ACAGGTATCCCTCCTGCACCTCGAGGTGTACCACAGGTGGAGGTCACTTTTGACATCGAT 3725937 Query 552564 GCCAATGGAATTTTGAATGTGACTGC 552589 |||||||| ||| |||||||| |||| Sbjct 3725936 GCCAATGGCATTCTGAATGTGTCTGC 3725911 >seq243 Length=1028041 Score = 113 bits (124), Expect = 4e-19 Identities = 103/130 (79%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| ||||| || ||||| || || || |||||||| || || || || ||||| |||| Sbjct 210102 ATGCTGTAATTACAGTACCCGCCTACTTCAATGACTCCCAGCGCCAGGCCACTAAGGATG 210161 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 |||| || |||| || |||||||| || || ||||||||||| ||||||||||| Sbjct 210162 CTGGCACAATCTCTGGCCTCAATGTTCTGCGAATCATCAATGAACCAACTGCTGCTGCCA 210221 Query 550518 TTGCATATGG 550527 |||||||||| Sbjct 210222 TTGCATATGG 210231 Score = 91.5 bits (100), Expect = 1e-12 Identities = 102/135 (76%), Gaps = 1/135 (1%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || || || || || ||||||||||||||||| ||||||||||| || || || | Sbjct 193163 ATGCTGTTATCACAGTTCCTGCATATTTTAATGACTCTCAACGTCAAGCAACCAAGGACG 193104 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 | ||| ||| |||| || ||||| | | || || ||||| || ||||| || || Sbjct 193103 CCGGAACTATCTCTGGTCTAAATGTGTTGAGAATAATTAATGAGCCCACTGCAGCAGCTA 193044 Query 550518 TTGCATATGGACTTG 550532 |||| ||||| |||| Sbjct 193043 TTGCTTATGG-CTTG 193030 Score = 86.0 bits (94), Expect = 5e-11 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| || ||||||||||||| || |||| ||||||||| Sbjct 193847 GGCATTGATCTTGGGACCACCTACTCCTGTGTTGGTGTTTTCCAGCATGGCAAAGTTGAA 193788 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || ||||||||||| || || ||||| || || || ||||| | |||||||| | | Sbjct 193787 ATCATTGCCAATGACCAGGGCAACAGGACCACACCCAGCTATGTGGCCTTCACGGATAGT 193728 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCA 550149 || | | | || |||||||| || |||| Sbjct 193727 GAGCGGCTGATCGGAGATGCAGCCAAGAATCA 193696 >seq232 Length=660048 Score = 113 bits (124), Expect = 4e-19 Identities = 113/147 (77%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| ||||||| || || || || || || || ||||| || || |||||||| || Sbjct 77981 GTTACCAATGCAGTCATCACAGTGCCTGCTTACTTCAATGATTCCCAGCGTCAAGCCACC 78040 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 ||||||||||| ||| |||| |||||||| || || || |||||||| ||||| ||| Sbjct 78041 AAAGATGCTGGCACTATCTCTGGGCTTAATGTGCTGCGCATCATCAATGAGCCTACAGCT 78100 Query 550511 GCTGCACTTGCATATGGACTTGATAAA 550537 || || |||| ||||| || || ||| Sbjct 78101 GCAGCCATTGCTTATGGCCTGGACAAA 78127 >seq280 Length=515715 Score = 98.7 bits (108), Expect = 8e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || || || ||||||||||| || || || || || ||||| || || ||| Sbjct 41011 ACCGTGCCCGCCTACTTTAATGACTCTCAGCGCCAGGCCACCAAAGACGCAGGGACCATT 40952 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 |||| |||||||| |||||||| |||||||| || ||||||||||| | || ||||| Sbjct 40951 TCTGGGCTTAATGTCCTTCGTATCATCAATGAGCCAACTGCTGCTGCTATAGCTTATGGC 40892 Query 550529 CTTGATAAA 550537 || || ||| Sbjct 40891 CTGGACAAA 40883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028205415634780