Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17]
20,622 sequences; 684,144,148 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq405 141 8e-29
seq40 109 4e-19
>seq405
Length=505804
Score = 141 bits (156), Expect = 8e-29
Identities = 137/175 (78%), Gaps = 1/175 (1%)
Strand=Plus/Plus
Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209
||||| ||||||||||| || || |||||||||||||| || ||||| |||||||||||
Sbjct 92352 CATGTTTGTGTACTCTGCACCAAAGTGCCTCCACTGGAAACCATACACAGGTCCCAGGTC 92411
Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269
||||||||||||| ||| || |||||| ||||| | || || ||||| ||
Sbjct 92412 GCCCTCTTCCCTGTCTGTGAACCCAAGACTGTCCAGGAAGTCCCGTGATCCATTGGCATC 92471
Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 30323
||| ||||| || || |||| ||||||||| |||| ||||| || |||| ||||
Sbjct 92472 CCAAATCTTCACACCTTTCTTGGAGAGCTCCTTGGCATTTGTTGATCCCTATGAC 92526
Score = 138 bits (152), Expect = 9e-28
Identities = 129/164 (79%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928
|| || |||| ||| || |||||||| || || || | |||||||||||||| || ||
Sbjct 89368 AGTCCTGTGATGTGTGCAATCATGTAGGTAAGAAGTGCATAGCTGGCGATGTTGAATGGC 89427
Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988
||||| || ||||| || ||||| | |||||| |||||||| || ||||| || || | |
Sbjct 89428 ACCCCAAGGCCCATATCACCCGAGCGCTGGTACAGCTGACAAGAAAGCTCGCCATCACAC 89487
Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAG 30032
||||| ||||| |||| || ||||| ||||| |||||||| ||
Sbjct 89488 ACGTAGAACTGGCACAGGGCATGGCAGGGAGGCAGAGCCATAAG 89531
>seq40
Length=6890715
Score = 109 bits (120), Expect = 4e-19
Identities = 86/103 (83%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 112107 CTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 112166
||||||||||||||| | ||| ||||||||| |||||||||| | ||| || || |||||
Sbjct 4743263 CTCCCTGCTGAGGACAATGTTGATCCTGTCTTTCAGAGGTCTGTGCTTCTCTGGAATGGA 4743322
Query 112167 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209
||||| |||||||| ||||| | ||||| ||||| ||||||
Sbjct 4743323 AAACCACGTCTTTCTGCCCATGAGTACCACATTCTGTTTGCCT 4743365
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408514901883206
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |