Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq405 141 8e-29 seq40 109 4e-19 >seq405 Length=505804 Score = 141 bits (156), Expect = 8e-29 Identities = 137/175 (78%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209 ||||| ||||||||||| || || |||||||||||||| || ||||| ||||||||||| Sbjct 92352 CATGTTTGTGTACTCTGCACCAAAGTGCCTCCACTGGAAACCATACACAGGTCCCAGGTC 92411 Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269 ||||||||||||| ||| || |||||| ||||| | || || ||||| || Sbjct 92412 GCCCTCTTCCCTGTCTGTGAACCCAAGACTGTCCAGGAAGTCCCGTGATCCATTGGCATC 92471 Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 30323 ||| ||||| || || |||| ||||||||| |||| ||||| || |||| |||| Sbjct 92472 CCAAATCTTCACACCTTTCTTGGAGAGCTCCTTGGCATTTGTTGATCCCTATGAC 92526 Score = 138 bits (152), Expect = 9e-28 Identities = 129/164 (79%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928 || || |||| ||| || |||||||| || || || | |||||||||||||| || || Sbjct 89368 AGTCCTGTGATGTGTGCAATCATGTAGGTAAGAAGTGCATAGCTGGCGATGTTGAATGGC 89427 Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988 ||||| || ||||| || ||||| | |||||| |||||||| || ||||| || || | | Sbjct 89428 ACCCCAAGGCCCATATCACCCGAGCGCTGGTACAGCTGACAAGAAAGCTCGCCATCACAC 89487 Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAG 30032 ||||| ||||| |||| || ||||| ||||| |||||||| || Sbjct 89488 ACGTAGAACTGGCACAGGGCATGGCAGGGAGGCAGAGCCATAAG 89531 >seq40 Length=6890715 Score = 109 bits (120), Expect = 4e-19 Identities = 86/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 112107 CTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 112166 ||||||||||||||| | ||| ||||||||| |||||||||| | ||| || || ||||| Sbjct 4743263 CTCCCTGCTGAGGACAATGTTGATCCTGTCTTTCAGAGGTCTGTGCTTCTCTGGAATGGA 4743322 Query 112167 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209 ||||| |||||||| ||||| | ||||| ||||| |||||| Sbjct 4743323 AAACCACGTCTTTCTGCCCATGAGTACCACATTCTGTTTGCCT 4743365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408514901883206