Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq328 239 8e-58 seq1512 105 1e-17 seq334 105 1e-17 seq34 96.9 6e-15 >seq328 Length=840127 Score = 239 bits (264), Expect = 8e-58 Identities = 807/1239 (65%), Gaps = 32/1239 (3%) Strand=Plus/Minus Query 221419 CAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGA 221478 |||||| |||| |||||| |||||||||||| |||| || || ||||| ||| Sbjct 221292 CAGGGCTGCGTAGTAGATAGTCTCAAAGATCTGGGTGTTCAGCAGCTGTGCCTCAGGACT 221233 Query 221479 AGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538 ||||| ||||| || ||| | || |||| ||||| |||||||| || || Sbjct 221232 TTCAAAGGGGTAACGCATCAGGATGAAGGCATCTGCCAAACCCTGGACTCCGATTCCTAT 221173 Query 221539 GGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGAT 221598 |||||||| | ||||||| | ||||| || || ||||| |||| | |||||| Sbjct 221172 TGGCCTGTGACGTTTGTTGGACTTCTCGGCTTCAGGTACTGGATAGTAGTTAATGTCGAT 221113 Query 221599 CAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAA 221658 | |||| | ||| || ||||| ||| | | ||| || | |||| Sbjct 221112 GATCCTGTTCAAGTTTTTGACAATAACTTTGGTCACATATGCCAGTTTTT------TGAA 221059 Query 221659 CACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAG 221718 | | | | || || |||||| || | | | || || || | | ||||| Sbjct 221058 GTCGTA-TGTCTGC--TC----AGGGGTAACATACATG--TTGAGAGCGATGGAAGCCAG 221008 Query 221719 GTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCT 221778 ||||| || || ||||| || ||| ||| || | | | ||||| ||||||||||| Sbjct 221007 ATTACAGACCGCTACCTCATCTTTGCCGGTGTATTCGACAACTTCTGTGCAGAGGTTGCT 220948 Query 221779 GCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAG 221838 ||| |||||||| ||||||| | || || ||| || ||| ||||| ||||| || Sbjct 220947 GCATTTGATGGTTCCCAGGTTCTGCTGGTTGCTCTTCCGGTTGCAGGCGTCTTTGTACAG 220888 Query 221839 CATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-G 221897 ||| | || ||||| || ||| | | | | ||| || ||| || | ||| | Sbjct 220887 CATGTATGGTGTACCAGTTTCTGTCTGGGACTCGATAATGGCGTACCACAGCTG-CTGAG 220829 Query 221898 CGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAA 221957 | ||||| | ||||| ||||| ||||||||| ||| ||||| || | Sbjct 220828 CCTTCACCACTCGTTTGACCCTCCCCTC---CTTTTCATATTTGGTGTAGAGTTCCTCGA 220772 Query 221958 ACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGT 222017 ||| || || | ||| ||||| || || ||| | |||||||||| | ||||| Sbjct 220771 ACTCCTCCCCCCAGCACTCATCCAGTCCAGGGCACTCGTTCGGACACATCAAAGACCAGT 220712 Query 222018 GCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGAT 222077 | |||| | || |||| |||||| | ||| |||||||||| || | ||| |||| Sbjct 220711 CTTGGTTGCTCTCCACTCTCTTCATGAACAAGTCTGGGATCCACAAGGCATAAAAAAGAT 220652 Query 222078 CTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGT 222137 |||||| || |||||||||| || |||| ||| |||| |||| || ||||| | | Sbjct 220651 CTCTGGCCCTCTGCTCCTCCTTCCCTGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACAT 220592 Query 222138 CAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGAT 222197 || |||||| |||||||| || | ||| | ||||||||||| ||||||||||||||| | Sbjct 220591 CAAAGTGCCAGGGCTCCAGGTACATGGCGAAAGCGCCGGGTCTCTTGTTGCCACCCTGGT 220532 Query 222198 CCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGA 222256 | | ||| | | | | |||| | | | || | || ||||| || || || Sbjct 220531 CGA-CATAACGTGCCGTGTTGTTGTATACTCTCAGCATGGGGACCAGCCCATTTGAATTG 220473 Query 222257 CCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCCGATA 222316 || |||||||| ||||| || ||| || | ||| | | || || || Sbjct 220472 CCATTGGTGCCAGCGATGTAGCTCCCTGTGGCTCTGATACAGCTGACCGCCACACCTATT 220413 Query 222317 CCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATA 222376 || || || ||| ||||| | ||| || ||| || ||||| |||||||| || Sbjct 220412 CCTCCAGCCGATTTGGAGATGAGGGCACACTGCTTCAGTGTGTCATATATGCCCTCAATG 220353 Query 222377 GAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCG 222436 ||| ||||| | | ||||| || || || | ||| | | ||| | || Sbjct 220352 CTGTCGTCCTTCATGGCAAGCAGGAAGCAGCTGGATAGCTGTGGCTGTTTGGTTCCTGCA 220293 Query 222437 TTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCT 222496 ||||| || || ||| ||| || || || | | || | ||| | ||| ||||| Sbjct 220292 TTAAAAAGTGTAGGAGAGGCATGGGTGAACCACTTCTCTGAGAGCAGGTTGTAGGTCTCA 220233 Query 222497 ACGACTCTGGCGATGTTGTCCCCGTGAATCTGCAT-GGCGCATCTCATGTACATGTACTG 222555 | | || | |||| | | ||||| || | ||| || ||||||| ||||| ||| Sbjct 220232 ATGGCTGCGTCGATATCGGTTCCGTGGAT-TCCATCCGCCACTCTCATGAGCATGTGCTG 220174 Query 222556 GGGCCTCT---CCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTT 222612 |||| || |||| || || || || |||||||| || | ||||| ||||| Sbjct 220173 CGGCCGCTCGGCCACTTTGCCGTT-GATCT--TCAGCAGGTAGGACCTCTCCAGGGTCTT 220117 Query 222613 GAACCCAAAGTAGTTG-AGGTCAAAGTCTCTGCCGTGAA 222650 ||| |||||| ||||| ||| ||| ||| || ||| || Sbjct 220116 GAATCCAAAGAAGTTGTAGGAGAAA-TCTTTGTCGTAAA 220079 >seq1512 Length=3299 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| |||| || || || || |||||||| ||||| ||| || || || || Sbjct 347 GGGGAGCGTGTGGTGGCGTTCGCGGCCGTGGAGGGAATCTTCTTCTCTGGGTCCTTCGCT 288 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 || ||||||||||| ||| ||| || |||||||| ||| ||| |||||||||||| Sbjct 287 GCGATCTTCTGGCTGAAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTC 228 Query 25993 ATCAGCAGGGACGAGG 26008 |||||||| ||||||| Sbjct 227 ATCAGCAGAGACGAGG 212 >seq334 Length=631087 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| |||| || || || || |||||||| ||||| ||| || || || || Sbjct 411940 GGAGAGCGTGTGGTGGCGTTCGCGGCCGTGGAGGGAATCTTCTTCTCTGGGTCCTTCGCT 411881 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 || ||||||||||| ||| ||| || |||||||| ||| ||| |||||||||||| Sbjct 411880 GCGATCTTCTGGCTGAAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTC 411821 Query 25993 ATCAGCAGGGACGAGG 26008 |||||||| ||||||| Sbjct 411820 ATCAGCAGAGACGAGG 411805 >seq34 Length=6032531 Score = 96.9 bits (106), Expect = 6e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| | || || ||||| |||||||| |||||||| ||| || || ||||| Sbjct 778668 GGGGAGCGAATTGTGGCTTTTGCAGCTGTGGAAGGCATCTTCTTCTCTGGCTCATTTGCT 778727 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 || |||| |||||||| ||| ||| |||||||| || || ||||||||||| Sbjct 778728 GCTATCTATTGGCTCAAAAAGAGGGGCCTAATGCCCGGTCTTACCTACTCCAACGAGCTG 778787 Query 25993 ATCAGCAGGGACGAGG 26008 ||||||||||| |||| Sbjct 778788 ATCAGCAGGGATGAGG 778803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928605367031680