Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq750 161 1e-33 seq243 134 2e-25 seq328 104 3e-16 seq119 86.0 8e-11 >seq750 Length=24568 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||||||||||||||| | | | || Sbjct 23984 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 24043 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| ||| |||||||| | ||||||| || | | Sbjct 24044 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCGGCGGCGATGCGCTCAAAGA 24103 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 24104 TGTCGTTGACAAAGGAGTTCATGATGCTCATGGCCTTGGACGAGATGCCGGTGTCAGGGT 24163 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | ||||| || || |||||||| Sbjct 24164 GGACCTGTTTCAGAACCTTGTA 24185 >seq243 Length=1028041 Score = 134 bits (148), Expect = 2e-25 Identities = 136/177 (77%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 1254368 CAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGC 1254427 |||||| ||||||||||||||||| | | | ||| ||| ||||||||| ||||||| Sbjct 187700 CAGGCGGACGGCGGTCTGGATCTCCCTGGAGGTGATGGTGGAGCGCTTGTTGTAGTGCGC 187759 Query 1254428 CAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAC 1254487 ||| || || || ||||||| || | ||||||||||||||||||||||||| Sbjct 187760 CAGTCGCGACGCTTCCCCAGCGATGCGCTCAAAGATGTCGTTGACAAACGAGTTCATGAT 187819 Query 1254488 CGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544 ||| | |||| |||||| ||| ||| || ||||||||||| ||||||||||| Sbjct 187820 GCCCATGGCCTTGGAGGAGATCCCCGTGTCTGGATGCACCTGCTTCAGCACCTTGTA 187876 >seq328 Length=840127 Score = 104 bits (114), Expect = 3e-16 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||| || || ||||||| ||| | || | |||||||| || || || || || Sbjct 220536 CTGGTCGACATAACGTGCCGTGTTGTTGTATACTCTCAGCATGGGGACCAGCCCATTTGA 220477 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTG-TGCGCGGCAAAGC 1630183 | ||| |||||||| || | |||| || | ||| | | | || || || | | Sbjct 220476 ATTGCCATTGGTGCCAGCGATGTAGCTCCCTGTGGCTCTGATACAGCTGACCGCCACA-C 220418 Query 1630184 CGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCT 1630243 | || || || ||||| ||||||||||| || ||||| || || ||||| || ||||||| Sbjct 220417 CTATTCCTCCAGCCGATTTGGAGATGAGGGCACACTGCTTCAGTGTGTCATATATGCCCT 220358 Query 1630244 CGATCGAGTCGGCCTTCATGTCCACGAGAAAGCA 1630277 | || |||| |||||||| | | || ||||| Sbjct 220357 CAATGCTGTCGTCCTTCATGGCAAGCAGGAAGCA 220324 >seq119 Length=1305147 Score = 86.0 bits (94), Expect = 8e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||||||||| | || ||||| ||||| ||| | |||||| | ||||||||| Sbjct 753491 GCCGCCAACTATTTGGATATCAAAGGCCTGCTAGATGTCACCTGCAAGACAGTGGCCAAC 753432 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295 |||||||| ||||| | || ||||||||| | ||||| || |||||||| Sbjct 753431 ATGATCAAAGGCAAAACCCCAGAGGAGATCAGGAAGACTTTCAACATCAA 753382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6105446862107174